Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9916 248 1e-63 seq13262 244 2e-62 seq12612 244 2e-62 seq10391 223 6e-56 seq4939 203 5e-50 seq5046 194 3e-47 seq6005 158 2e-36 seq7341 149 1e-33 seq699 123 4e-26 seq2926 109 9e-22 seq13899 87.8 3e-15 seq7177 73.4 6e-11 seq2918 73.4 6e-11 >seq9916 Length=2300 Score = 248 bits (274), Expect = 1e-63 Identities = 209/253 (83%), Gaps = 13/253 (5%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 624 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 566 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG-T 133 ||| || | |||||| | |||| | |||||||||||||| | | | || | | Sbjct 565 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGATCGCT 507 Query 134 CGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 || |||| ||| |||||| | | ||||||||||||||||||||||||||| Sbjct 506 CG--GGGGTTGCATAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAG 449 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 448 ACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCAAGAAAGAG 389 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 388 CTATCAATCTGTC 376 >seq13262 Length=5216 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 3364 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 3306 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 3305 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 3247 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 3246 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 3187 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 3186 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 3127 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 3126 ATCAATCTGTC 3116 >seq12612 Length=3819 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 2993 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 3051 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 3052 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 3110 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 3111 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 3170 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 3171 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 3230 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 3231 ATCAATCTGTC 3241 >seq10391 Length=4239 Score = 223 bits (246), Expect = 6e-56 Identities = 203/251 (81%), Gaps = 10/251 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||| || || ||| ||| | ||||||||||||||||||||||||||||||| || Sbjct 2412 TCAGTGTACCGTGCATGCACCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 2470 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC---CAGCCACCAACCAT-- 130 || || | |||||| | |||| |||||||||||||||| ||| |||| ||| Sbjct 2471 AATCT-CGGGTGGCTGAACGCCACTAGTCCCTCTAAGAAGTTGGCAGACACCGACCGCTC 2529 Query 131 AG---TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || ||| |||||||||||| | ||||||| || ||| || ||||||||||| Sbjct 2530 AGGGCTCGCGTACACTATTTAGCAGGCCACAGTCTCGTCCGCTATTGGCATTAACCAGAC 2589 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||| | ||||||||||||||||||||||||||||||||| || |||||| |||||||||| Sbjct 2590 AAAGCGCTCCACCAACTAAGAACGGCCATGCACCACCACACACAGAATCGAGAAAGAGCT 2649 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 2650 ATCAATCTGTC 2660 Score = 152 bits (168), Expect = 8e-35 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| | ||||||| || ||| || |||||||||||||| | |||||||| Sbjct 2885 CTATTTAGCAGGCCACAGTCTCGTCCGCTATTGGCATTAACCAGACAAAGCGCTCCACCA 2944 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| Sbjct 2945 ACTAAGAACGGCCATGCACCACCACACACAGAATCGAGAAAGAGCTATCAATCTGTC 3001 >seq4939 Length=37399 Score = 203 bits (224), Expect = 5e-50 Identities = 200/254 (79%), Gaps = 16/254 (6%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || ||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 31423 GTCAGTGTAGTGCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 31481 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--GCCACCAACCATAG 132 ||| || | | |||| | ||| | |||||||||||||| | | | |||| Sbjct 31482 CAATCT-CAGGTAGCTGAACTCCACTTGTCCCTCTAAGAAGTTGTGGACGCTGACCAC-- 31538 Query 133 TCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 ||| |||| ||| |||||| | | ||||| ||||||||| | |||||||| Sbjct 31539 TCG--GGGGTCACATAACTAGTTAGCATGCCAGAGTCTCATTCGTTATCAGGATTAACCA 31596 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 |||||||| |||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct 31597 GACAAATCGCTCCACCAACTAAGAATAGCCATGCACCACCACCCACGGAATCGAGAAAGA 31656 Query 245 GCTATCAATCTGTC 258 |||||||||||||| Sbjct 31657 GCTATCAATCTGTC 31670 >seq5046 Length=4847 Score = 194 bits (214), Expect = 3e-47 Identities = 200/255 (78%), Gaps = 20/255 (8%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||| || || ||| |||| | |||||||||||||||||||||||||| | ||| Sbjct 4119 GTCAGTGTACCGTGCATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTTT--CCT 4062 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAACCATA 131 ||| ||| | ||||| | || |||||||||||||||| || |||| |||| Sbjct 4061 CAATCTTGGGT-GGCTGAA---CACTAGTCCCTCTAAGAAGTTGGGAGACACCGACCAC- 4007 Query 132 GTCGATGGGGC---TAT-----TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 || | || | ||| |||||||| | ||||||| |||||| || ||||||| Sbjct 4006 -TC-AGGGCTCACATATACTGGTTAGCAGGCCACAGTCTCGTCCGTTATTGGCATTAACC 3949 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||||| | |||||||||||||||||||||||||| |||||| || |||||| |||||| Sbjct 3948 AGACAAAGCGCTCCACCAACTAAGAACGGCCATGCAGCACCACACACAGAATCGAGAAAG 3889 Query 244 AGCTATCAATCTGTC 258 |||||||||||||| Sbjct 3888 GGCTATCAATCTGTC 3874 >seq6005 Length=723753 Score = 158 bits (174), Expect = 2e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 520152 GTCTCATTCATTATTGGAATTAACCAGACAAATCACTCCACCAACTAAGAAAGGCCATGC 520211 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||||||||||||||||||||||||||| Sbjct 520212 ACCACCACCCATGGAATCAAGAAAGAGCTATCAATCTGTC 520251 >seq7341 Length=112029 Score = 149 bits (164), Expect = 1e-33 Identities = 87/90 (97%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83345 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 83404 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||| ||||||||||||||||||||| Sbjct 83405 ACGGAATCGAGAAAGAGCTATCAATCTGTC 83434 >seq699 Length=1497358 Score = 123 bits (136), Expect = 4e-26 Identities = 88/100 (88%), Gaps = 6/100 (6%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||| Sbjct 8471 GTCTCGTTTGTTATCGGAGTTAACCAGACAAA--ACTCCACCAA----GAACGGCCATGC 8418 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||| |||| ||||| ||||||||||||||||||||| Sbjct 8417 ATCACCAGCCATGGAATCCAGAAAGAGCTATCAATCTGTC 8378 >seq2926 Length=327913 Score = 109 bits (120), Expect = 9e-22 Identities = 94/116 (81%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 || |||||| | | |||| |||| ||||| |||||||| || |||||||||||| | Sbjct 248598 TAGTTAGCATGCCAGAGTCTTGTTCATTATCAGAATTAACGAGCCAAATCACTCCA---A 248654 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | ||||| ||||||||||| ||||| |||||||||| ||||||| || Sbjct 248655 CTAAGAATGCCCATGTACCACCACCCACAGAATAGAGAAAGAGCTGTCAATCTATC 248710 >seq13899 Length=5161 Score = 87.8 bits (96), Expect = 3e-15 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 |||||||||| |||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 5102 GTCAGTGTAGTGCGCGTGCAGCCCCGTACATCTAAGGGCATCACAGACCTGTTATTGC 5159 >seq7177 Length=332908 Score = 73.4 bits (80), Expect = 6e-11 Identities = 65/79 (82%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107 |||||||||||||||||||||||| ||||| | || |||||| | |||| | |||||| Sbjct 284960 AAGGGCATCACAGACCTGTTATTG-CTCAATC-TCGGGTGGCTGAACGCCACTTGTCCCT 284903 Query 108 CTAAGAAGCCAGCCACCAA 126 |||||||| || ||| || Sbjct 284902 CTAAGAAGTCATACACTAA 284884 >seq2918 Length=538961 Score = 73.4 bits (80), Expect = 6e-11 Identities = 61/72 (85%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 47 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106 ||||||||||||||||||||||||| ||||| | || |||||| | |||| | ||||| Sbjct 180248 TAAGGGCATCACAGACCTGTTATTG-CTCAATC-TCGGGTGGCTGAACGCCACTTGTCCC 180191 Query 107 TCTAAGAAGCCA 118 ||||||||| || Sbjct 180190 TCTAAGAAGTCA 180179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796503845127