Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq13262 91.5 9e-17 seq9916 91.5 9e-17 seq12612 82.4 5e-14 seq13899 71.6 8e-11 >seq13262 Length=5216 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 3562 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 3505 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 3504 TAAT-CAACGCAAGCT 3490 >seq9916 Length=2300 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 822 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 765 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 764 TAAT-CAACGCAAGCT 750 >seq12612 Length=3819 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| || ||||| || ||||||||||||||||||| Sbjct 2795 CTCACTAAACCATC-CAATCGGTAGTA-GCAACGGGTGGTGTGTACAAAGGGCAGGGACT 2852 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 2853 TAAT-CAACGCAAGCT 2867 >seq13899 Length=5161 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/76 (83%), Gaps = 7/76 (9%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||| ||| ||||||||||||||||||| Sbjct 4908 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGACGGTGTGTACAAAGGGCAGGGACT 4965 Query 109 TAATACAACGCAAGCT 124 | |||||||||| Sbjct 4966 T-----AACGCAAGCT 4976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300691805060