Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq14008 174 2e-41 seq14590 159 5e-37 seq15156 114 2e-23 seq4873 114 2e-23 seq4974 98.7 1e-18 seq11086 96.9 5e-18 >seq14008 Length=3101 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 2132 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 2189 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 2190 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 2249 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 2250 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 2309 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 2310 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 2362 >seq14590 Length=5022 Score = 159 bits (176), Expect = 5e-37 Identities = 179/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 3329 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 3272 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 3271 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 3212 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || | ||| |||||||||||| |||| Sbjct 3211 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCGCACGTGAA 3152 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 3151 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGAGTGGC 3099 >seq15156 Length=4797 Score = 114 bits (126), Expect = 2e-23 Identities = 145/195 (74%), Gaps = 7/195 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| | Sbjct 4609 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 4662 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 |||||| | | || ||||||||| | |||||||||||| ||| || | | || Sbjct 4663 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTT 4722 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| |||| ||| | || || ||| ||||||||| |||||||| Sbjct 4723 ACCCGCACCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGTGCGCGTGCA 4782 Query 180 GCCCAGAACATCTAA 194 |||| | |||||||| Sbjct 4783 GCCCCGGACATCTAA 4797 >seq4873 Length=34506 Score = 114 bits (126), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 16/230 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| |||||||| || || | ||||| ||||| ||| |||||| |||||| | Sbjct 28562 GTACAAAGTGCAGGGACTTA----ACACAAGCTT-ATGACCCGCACTTACTGGGAATT-C 28615 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 || ||| | | || ||||||||| ||| |||||| |||| ||||| | Sbjct 28616 CTTGTTCATGGGGAATAATTGCAATCCCTGTTCCTCATCAC----AAATGGGGTTCAACG 28671 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||| || ||||| | || ||| | || || ||| ||||||||| || || Sbjct 28672 GGTTACACGCACCTGCCAGCATAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGTGCACG 28731 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 28732 TGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 28780 >seq4974 Length=4795 Score = 98.7 bits (108), Expect = 1e-18 Identities = 166/234 (71%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||| |||| || |||| |||| |||||| || |||||| |||| | Sbjct 4268 GTACAAACGGCAAGGACTTA----ACGCAAGCT-GATGACCTGCACTTACTGCGAATG-C 4215 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||| | | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 4214 CTCGCTCATGGGTAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGGGTT 4155 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | |||| | || || | || | ||| |||||||| || || ||| Sbjct 4154 ACCCCG-CCTGCCAGCATAGAGTAGGCACACACTGAGCCAGTCAGTGTACCGTGCATGCA 4096 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | ||||||||||||||||||||||||| || |||||| ||| ||||| Sbjct 4095 GCCCCGGACATCTAAGGGCATCACAGACCTGT--TTTCCTCAATCTTGGGTGGC 4044 >seq11086 Length=4183 Score = 96.9 bits (106), Expect = 5e-18 Identities = 166/234 (71%), Gaps = 9/234 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||| |||| || | || |||| |||||| ||| |||||| |||| | Sbjct 2204 GTACAAACGGCAAGGACTTAAT----GCAAGCT-GATGACCCGCACTTACTGCGAATG-C 2257 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||| | | | || ||||||||| ||||||||||||| ||||| | | Sbjct 2258 CTCACTCATGGGAAATAATTGCAATCCCTGATCCCCATCACGAATGGGGTTCAATGGGTT 2317 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGCG 179 ||| ||||| | || || | || | ||| ||| |||||||| | |||||| Sbjct 2318 CCCCCACCTGCCAGCGTAGAGTAGGCACACACTGAG-ACACTCAGTGTACCATGCGTGCA 2376 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 2377 GCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 2429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751804965980