Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq15156 149 3e-33 seq10967 122 4e-25 seq3594 114 5e-23 seq6263 95.1 5e-17 seq4873 89.7 2e-15 >seq15156 Length=4797 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 292 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 233 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 232 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 173 Score = 120 bits (132), Expect = 1e-24 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 1859 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1800 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 1799 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG--A 1742 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 1741 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 1702 >seq10967 Length=1292 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 932 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 991 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 992 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 1051 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 1052 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 1091 >seq3594 Length=4424 Score = 114 bits (126), Expect = 5e-23 Identities = 84/98 (86%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||||||||||| |||| |||||||||||||||||||||||||| || |||||| ||| Sbjct 4246 AACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTG 4187 Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| ||||| | ||||||||||||||| Sbjct 4186 ACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4149 >seq6263 Length=109817 Score = 95.1 bits (104), Expect = 5e-17 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634 |||||| |||||||||||||| | |||||||||||||||||||||||||| || | Sbjct 60908 GAAAGACGGTGAACTATGCCTCGGCAAGGTGAAGCCAGAGGAAACTCTGGTGGCGGTCTG 60967 Query 635 CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||||| || | |||||||| | ||| | ||||||||||||| Sbjct 60968 TAGCGGTCCTAACCTGCAAATCAGTTGTCTGACCTGGGTATAGGGGC 61014 >seq4873 Length=34506 Score = 89.7 bits (98), Expect = 2e-15 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||||||||||||||||| | || ||| | |||| | ||||| ||||||| Sbjct 25613 GAGTTGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGCTAAACTCTATCTAAGGCTAAAT 25554 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||| ||||| ||||||| || | | || ||||||| |||||| | Sbjct 25553 ACCGGCATGAGACTGATAGTCAACAAGTACTGTAAGGGCAAATTGAAAAGAACTTTG--A 25496 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| | || ||||||| Sbjct 25495 AGAGAGTTCATGAGGGCGTGAAA 25473 Score = 84.2 bits (92), Expect = 9e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 ||||||||||||||||||||||| || |||||| ||| | ||||||||| ||||| | Sbjct 24374 GCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACATGCAAATCGGTCGTCCGAC 24315 Query 668 TTGGGTATAGGGGCGA 683 ||| ||||||||||| Sbjct 24314 CTGGATATAGGGGCGA 24299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079425740600