Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq14008 244 2e-62 seq14590 228 1e-57 seq4873 203 5e-50 seq4974 190 3e-46 seq11086 150 3e-34 seq9708 149 1e-33 seq5907 149 1e-33 seq7217 140 5e-31 seq696 123 4e-26 seq2896 109 9e-22 seq2888 78.8 1e-12 seq7055 73.4 6e-11 >seq14008 Length=3101 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 2290 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 2348 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 2349 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 2407 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 2408 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 2467 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 2468 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 2527 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 2528 ATCAATCTGTC 2538 >seq14590 Length=5022 Score = 228 bits (252), Expect = 1e-57 Identities = 206/255 (81%), Gaps = 17/255 (7%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 3171 GTCAGTGTAGCGCACGTGAAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 3113 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131 ||| || | | |||||| | |||| | |||||||||||||| | | || ||| Sbjct 3112 CAATCT-CGAGTGGCTGAACGCCACTTGTCCCTCTAAGAAGATGGGGGACGCCGACCGC- 3055 Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 ||| |||| ||| |||||||| | |||||| ||| |||||||||||||| Sbjct 3054 -TCG--GGGGTCACGTAACTAGTTAGCAGGCCACAGTCTCGATCGCTATCGGAATTAACC 2998 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 2997 AGACAAAACGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAG 2938 Query 244 AGCTATCAATCTGTC 258 ||||||||||||||| Sbjct 2937 AGCTATCAATCTGTC 2923 >seq4873 Length=34506 Score = 203 bits (224), Expect = 5e-50 Identities = 200/254 (79%), Gaps = 16/254 (6%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || ||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 28716 GTCAGTGTAGTGCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 28774 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--GCCACCAACCATAG 132 ||| || | | |||| | ||| | |||||||||||||| | | | |||| Sbjct 28775 CAATCT-CAGGTAGCTGAACTCCACTTGTCCCTCTAAGAAGTTGTGGACGCTGACCAC-- 28831 Query 133 TCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 ||| |||| ||| |||||| | | ||||| ||||||||| | |||||||| Sbjct 28832 TCG--GGGGTCACATAACTAGTTAGCATGCCAGAGTCTCATTCGTTATCAGGATTAACCA 28889 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 |||||||| |||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct 28890 GACAAATCGCTCCACCAACTAAGAATAGCCATGCACCACCACCCACGGAATCGAGAAAGA 28949 Query 245 GCTATCAATCTGTC 258 |||||||||||||| Sbjct 28950 GCTATCAATCTGTC 28963 >seq4974 Length=4795 Score = 190 bits (210), Expect = 3e-46 Identities = 199/255 (78%), Gaps = 20/255 (8%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||| || || ||| |||| | |||||||||||||||||||||||||| | ||| Sbjct 4115 GTCAGTGTACCGTGCATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTTT--CCT 4058 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAACCATA 131 ||| ||| | ||||| | || |||||||||||||||| || |||| |||| Sbjct 4057 CAATCTTGGGT-GGCTGAA---CACTAGTCCCTCTAAGAAGTTGGGAGACACCGACCAC- 4003 Query 132 GTCGATGGGGC---TAT-----TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 || | || | ||| |||||||| | ||||||| |||||| || ||||||| Sbjct 4002 -TC-AGGGCTCACGTATACTGGTTAGCAGGCCACAGTCTCGTCCGTTATTGGCATTAACC 3945 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||||| | |||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct 3944 AGACAAAGCGCTCCACCAACTAAGAACGGCCATGCAGCACCACACACGGAATCGAGAAAG 3885 Query 244 AGCTATCAATCTGTC 258 |||||||||||||| Sbjct 3884 GGCTATCAATCTGTC 3870 >seq11086 Length=4183 Score = 150 bits (166), Expect = 3e-34 Identities = 92/98 (94%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 2847 GTCTCGATCGCTATCGGAATTAACCAGACAAAACGCTCCACCAACTAAGAACGGCCATGC 2906 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 ||||||||||| |||||| ||||||||||||||||||| Sbjct 2907 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTG 2944 Score = 134 bits (148), Expect = 2e-29 Identities = 149/194 (77%), Gaps = 10/194 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||| | |||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 2358 TCAGTGTACCATGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 2416 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC---CAGCCACC-AACCATA 131 || || | |||||| | |||| |||||| ||||||||| ||| |||| ||| | Sbjct 2417 AATCT-CGGGTGGCTGAACGCCACTAGTCCGTCTAAGAAGTTGGCAGACACCGAACGCTC 2475 Query 132 GTCGATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | |||||||||||| | ||||||| || ||| || ||||||||||| Sbjct 2476 AGGGCTCGCGTACACTATTTAGCAGGCCACAGTCTCGTCCGCTATTGGCATTAACCAGAC 2535 Query 188 AAATCACTCCACCA 201 ||| | |||||||| Sbjct 2536 AAAGCTCTCCACCA 2549 >seq9708 Length=2199 Score = 149 bits (164), Expect = 1e-33 Identities = 147/186 (79%), Gaps = 17/186 (9%) Strand=Plus/Minus Query 53 CATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAG 112 |||||||||||||||||||| |||| || | |||||| | |||| | ||||||||||| Sbjct 497 CATCACAGACCTGTTATTGC-TCAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAG 440 Query 113 AAGCCAGC---CACCAACCATAGTCGATGGGG--------CTATTTAGCAGGTTAAGGTC 161 ||| | |||| ||| ||| |||| ||| |||||| | | ||| Sbjct 439 AAGTTGGGGGACACCGACCGC--TCG--GGGGTTGCATAACTAGTTAGCATGCCAGAGTC 384 Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 383 TCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACC 324 Query 222 ACCACC 227 |||||| Sbjct 323 ACCACC 318 >seq5907 Length=720716 Score = 149 bits (164), Expect = 1e-33 Identities = 93/100 (93%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||| ||| |||| |||||||||||||||||||||||||||||||||||| || ||||| Sbjct 518023 GTCTCATTCATTATTGGAATTAACCAGACAAATCACTCCACCAACTAAGAAAGGTCATGC 518082 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||||||||||||||||||||||||||| Sbjct 518083 ACCACCACCCACGGAATCAAGAAAGAGCTATCAATCTGTC 518122 >seq7217 Length=109891 Score = 140 bits (154), Expect = 5e-31 Identities = 85/90 (94%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 83067 TTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCT 83126 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||| ||||||||||||||||||||| Sbjct 83127 ACGGAATCGAGAAAGAGCTATCAATCTGTC 83156 >seq696 Length=1484547 Score = 123 bits (136), Expect = 4e-26 Identities = 88/100 (88%), Gaps = 6/100 (6%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||| Sbjct 8450 GTCTCGTTTGTTATCGGAGTTAACCAGACAAA--ACTCCACCAA----GAACGGCCATGC 8397 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||| |||| ||||| ||||||||||||||||||||| Sbjct 8396 ATCACCAGCCATGGAATCCAGAAAGAGCTATCAATCTGTC 8357 >seq2896 Length=324542 Score = 109 bits (120), Expect = 9e-22 Identities = 94/116 (81%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 || |||||| | | |||| |||| ||||| |||||||| || |||||||||||| | Sbjct 246859 TAGTTAGCATGCCAGAGTCTTGTTCATTATCAGAATTAACGAGCCAAATCACTCCA---A 246915 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | ||||| ||||||||||| ||||| |||||||||| ||||||| || Sbjct 246916 CTAAGAATGCCCATGTACCACCACCCACAGAATAGAGAAAGAGCTGTCAATCTATC 246971 >seq2888 Length=532829 Score = 78.8 bits (86), Expect = 1e-12 Identities = 62/72 (86%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 47 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106 ||||||||||||||||||||||||| ||||| | || | |||||| | |||| | ||||| Sbjct 178379 TAAGGGCATCACAGACCTGTTATTG-CTCAATC-TCGAGTGGCTGAACGCCACTTGTCCC 178322 Query 107 TCTAAGAAGCCA 118 ||||||||| || Sbjct 178321 TCTAAGAAGTCA 178310 >seq7055 Length=328665 Score = 73.4 bits (80), Expect = 6e-11 Identities = 65/79 (82%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107 |||||||||||||||||||||||| ||||| | || |||||| | |||| | |||||| Sbjct 281681 AAGGGCATCACAGACCTGTTATTG-CTCAATC-TCGGGTGGCTGAACGCCACTTGTCCCT 281624 Query 108 CTAAGAAGCCAGCCACCAA 126 |||||||| || ||| || Sbjct 281623 CTAAGAAGTCATACACTAA 281605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796593346932