Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq14008 197 3e-48 seq14590 188 1e-45 seq15156 129 1e-27 seq4873 127 4e-27 seq4974 125 1e-26 seq11086 116 7e-24 >seq14008 Length=3101 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 2388 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 2331 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || || || | | Sbjct 2330 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 2271 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 2270 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 2211 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 2210 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 2151 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 2150 AAGTCCCTGCCCTTTGTA 2133 >seq14590 Length=5022 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | || | ||||| |||||||||||||||| Sbjct 3073 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACTCGA-GATTGAG-CAATAACAGGTCTGTG 3130 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||| ||||||||||||| | || | || | | Sbjct 3131 ATGCCCTTAGATGTCCGGGGCTTCACGTGCGCTACACTGACTGGCTCAGTGTGTGCCTAC 3190 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 3191 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 3250 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 3251 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 3310 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 3311 AAGTCCCTGCCCTTTGTA 3328 >seq15156 Length=4797 Score = 129 bits (142), Expect = 1e-27 Identities = 144/192 (75%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||| | |||| |||||||| |||||||||| | || || || | | ||| | Sbjct 4797 TTAGATGTCCGGGGCTGCACGCGCACTACACTGACTGGCTCAGCGTGTGCCTACCCTACG 4738 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 |||| |||| |||||| | | || | | ||||| ||||||| | | |||||||||| Sbjct 4737 CCGGCAGGTGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATTGGGGATTGCAATTA 4678 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || | | | |||||||||| || |||||| ||| ||||| ||| ||| ||| |||| Sbjct 4677 TTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCG----TTAAGTCC 4622 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 4621 CTGCCCTTTGTA 4610 >seq4873 Length=34506 Score = 127 bits (140), Expect = 4e-27 Identities = 163/223 (73%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| ||||| || |||| Sbjct 28780 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGTGCACTAC 28722 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || || || | | ||| || || |||| | |||| | | || | Sbjct 28721 ACTGACTGGCTCAGCGTGTGCCTACCCTATGCTGGCAGGTGCGTGTAACCCGTTGAACCC 28662 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | | ||| || ||| | |||||||||||| | | | ||| |||||| || |||||| Sbjct 28661 CATTTGTGATGAGGAACAGGGATTGCAATTATTCCCCATGAACAAGGAATTCCCAGTAAG 28602 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||||| ||| | | ||| |||||||| ||||||| Sbjct 28601 TGCGGGTCATAAGCTTGTG----TTAAGTCCCTGCACTTTGTA 28563 >seq4974 Length=4795 Score = 125 bits (138), Expect = 1e-26 Identities = 186/257 (72%), Gaps = 10/257 (4%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||||| | ||| ||| | ||| |||||| || |||||||||||| Sbjct 4021 CTTCTTAGAGGGACTAGTGT-TCA-GCC-ACCCAAGATTGAGGAAA--ACAGGTCTGTGA 4075 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||| || || ||||||||| | || | || | | Sbjct 4076 TGCCCTTAGATGTCCGGGGCTGCATGCACGGTACACTGACTGGCTCAGTGTGTGCCTACT 4135 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || || || ||| | |||||| | | || | | ||||| ||||||| | | ||||| Sbjct 4136 CTATGCTGGCAGG-CGGGGTAACCCATTGAACCCCATTCGTGATGGGGATCGGGGATTGC 4194 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | | | | ||||| || | |||||| || ||||||||| ||| ||| Sbjct 4195 AATTATTACCCATGAGCGAGGCATTCGCAGTAAGTGCAGGTCATCAGCTTGCG----TTA 4250 Query 312 CGTCCCTGCCCTTTGTA 328 |||| |||| |||||| Sbjct 4251 AGTCCTTGCCGTTTGTA 4267 >seq11086 Length=4183 Score = 116 bits (128), Expect = 7e-24 Identities = 184/258 (71%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||| |||||| ||| | |||| || | ||||| |||||||||||||||| Sbjct 2455 CTTCTTAGACGGACTAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 2398 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||| | |||||||| | || | || | | Sbjct 2397 ATGCCCTTAGATGTCCAGGGCTGCACGCATGGTACACTGAGTGTCTCAGTGTGTGCCTAC 2338 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || || || |||| ||| || | | || | | ||||| ||||||| | |||| Sbjct 2337 TCTACGCTGGCAGGT-GGGGGAACCCATTGAACCCCATTCGTGATGGGGATCAGGGATTG 2279 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | | |||| || | |||||| ||| ||||||||| || ||| Sbjct 2278 CAATTATTTCCCATGAGTGAGGCATTCGCAGTAAGTGCGGGTCATCAGCTTGC----ATT 2223 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||| |||| |||||| Sbjct 2222 AAGTCCTTGCCGTTTGTA 2205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946946415616