Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq15875 295 2e-77 seq4974 237 5e-60 seq14590 223 1e-55 seq11086 192 2e-46 seq15738 179 1e-42 seq11039 179 1e-42 seq4873 154 4e-35 seq745 143 8e-32 seq4560 116 1e-23 seq368 77.0 1e-11 seq386 75.2 3e-11 >seq15875 Length=706 Score = 295 bits (326), Expect = 2e-77 Identities = 354/482 (73%), Gaps = 58/482 (12%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 228 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 287 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 347 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 348 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 407 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 408 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 467 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA------------------- 279 || | |||||| | | ||||| || ||||||| Sbjct 468 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 527 Query 280 ------GGAGCCCCGAAGG--------GCGTTGGTTTTTTATCTAATAAATACA------ 319 || ||| | ||| | ||||| |||| |||| |||||| || Sbjct 528 CCGGCCGGGGCCGGGGAGGAGCTCACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 586 Query 320 CCCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGT 372 |||| ||||| ||||| | |||||||||||||||||||||||||| || Sbjct 587 CCCCCCGCGAAG--GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGT 644 Query 373 TATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTC 427 |||||| |||| | || | | | |||| ||| ||||||||||||||||||||||| Sbjct 645 TATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTC 704 Query 428 GC 429 || Sbjct 705 GC 706 >seq4974 Length=4795 Score = 237 bits (262), Expect = 5e-60 Identities = 387/556 (70%), Gaps = 60/556 (11%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||| ||| | || ||||| | ||||| | ||||| | ||||||||||| Sbjct 3643 ACTCATTCCAATGACAGGGCCTCAAAATACTCCTGTGT---TATTTTTCGTCACTACCTC 3587 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||||||| ||||| |||||||| ||| |||||||||| ||||||||| || || Sbjct 3586 CCTGGGTCGGGAGTGGGTGATTTGCGCAGCTGGTGCCTTCCTTCAATGTGGTAGGCGATT 3527 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||| ||||| |||| | ||||||| | | |||| | |||||| ||| Sbjct 3526 CTCAGGCTCCCTCTCTGGAATTGAACACGGATTCCCCATCATCCGTGGCCACCATGATAG 3467 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | |||||||||| | |||||| |||||| || ||| | ||||||| | | Sbjct 3466 GCACCGTGACTACCATCGATACTTGATACGGCAGACGTTCGAACGGGTCATCGCCACCAC 3407 Query 242 AAG-GCCATGCGATTCGT--TAAGTTATTATGAATCACCAA----GGAGCCCCGAA---- 290 | | ||||||| | || | ||||| || ||||||| | ||||| | Sbjct 3406 GGGAGGCATGCGACTAGTCCAAGGTTATCTAGAGTCACCAAAGCTGCCGCCCCCCACCCC 3347 Query 291 GGGC-----------------------GTTGGTTTTTTATCTAATAAATACA-------C 320 |||| | | | |||| |||| |||||| || | Sbjct 3346 GGGCCGGGGCCGGGGAGAAGCTCACCGGGTTGCTTTTGATCTGATAAATGCACGCATCCC 3287 Query 321 CCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373 ||| ||||| ||||| | | ||||| || | |||||||||||||| || Sbjct 3286 CCCCCACGAAG--GGGGTCAGCACCTGTCGGCATGGATGAACTCTAGAATTACCAAAATT 3229 Query 374 ATCCATGTAGTA-AGG----TACTATCAAATAAACGATAACTGATTTAATGAGCCATTCG 428 || | |||| | ||| | | |||| ||| ||| |||||||||| ||||||||| Sbjct 3228 GTCAAAGTAGGACAGGAGCAAGCGACCAAAGGAACCATAGCTGATTTAATAAGCCATTCG 3169 Query 429 CAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGC 488 ||||||||||||| | | ||| ||||||||||||||||||||||| |||||||| Sbjct 3168 CAGTTTCACTGTACCAGCCGTGTGTACGTAGACATGCATGGCTTAATCTTTCAGACAAGC 3109 Query 489 ATATGACTACTGGCAG 504 ||||| ||||||||| Sbjct 3108 ATATG-TTACTGGCAG 3094 >seq14590 Length=5022 Score = 223 bits (246), Expect = 1e-55 Identities = 192/236 (81%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||| ||| | || ||||||| ||||||| ||||| | ||||||||||| Sbjct 2696 ACTCATTCCAATGACAGGGCCTCAAAAGACTCCTGTAT---TATTTTTCGTCACTACCTC 2640 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||||||| ||||| |||||| ||||||||||||||||| ||||||||| || || Sbjct 2639 CCTGAGTCGGGAATGGGTGATTTGCCCGCCTGCTGCCTTCCTTCAATGTGGTAGGCGATT 2580 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 |||||||||||||||||||||||||| ||||||| | |||||| | |||||||||| Sbjct 2579 CTCAGGCTCCCTCTCCGGAATCGAACATGGATTCCCCATCACCCGTGGTCACCATGGTAG 2520 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 || | ||||||||| ||||||||| |||||| || ||| | |||||||| Sbjct 2519 GCACCGTGACTACCATCGGAAGTTGATACGGCAGACGTTCGAACGGGTCATCGCCG 2464 Score = 143 bits (158), Expect = 8e-32 Identities = 135/167 (81%), Gaps = 10/167 (6%) Strand=Plus/Minus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAAT 399 |||| || | ||||||||||||||| ||||||| |||| | | | | | |||| Sbjct 2255 CATGAATGAACTCTAGAATTACCACAATTATCCAAGTAGGACAGGAGCAAGCGACCAAAG 2196 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATACTT 457 ||| ||| ||||||||||||||||||||||||||||||||| || || | ||||| Sbjct 2195 GAACCATAGCTGATTTAATGAGCCATTCGCAGTTTCACTGTACCAGCCATG--TCTACTT 2138 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 2137 AGACATGCATGGCTTAATCTTTCAGACAAGCATATG-TTACTGGCAG 2092 >seq11086 Length=4183 Score = 192 bits (212), Expect = 2e-46 Identities = 153/182 (84%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||| ||| | || ||||||| ||||||| ||||| | ||||||||||| Sbjct 3173 ACTCATTCCAATGACAGGGCCTCAAAAGACTCCTGTAT---TATTTTTCGTCACTACCTC 3229 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||| || || Sbjct 3230 CCCGGGTCGGGAGTGGGTGATTTGCACGCCTGCTGCCTTCCTTCAATGTGGTAGGCGATT 3289 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 |||||||||||||||||||||||||| | |||| |||| | | || | |||||||||| Sbjct 3290 CTCAGGCTCCCTCTCCGGAATCGAACACGGATTCTCCGTCATCTGTGGTCACCATGGTAG 3349 Query 182 GC 183 || Sbjct 3350 GC 3351 Score = 127 bits (140), Expect = 6e-27 Identities = 128/165 (78%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAAT 399 |||| || | |||||||| |||||| ||||||| |||| | | | | | |||| Sbjct 3657 CATGGATGAACTCTAGAAGTACCACAATTATCCAAGTAGGACAGAAGCAAGCGACCAAAG 3716 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 ||| ||| ||||||||||||||| || |||||||||||||| | | ||| ||| Sbjct 3717 GAACCATAGCTGATTTAATGAGCCTTTTGCAGTTTCACTGTACCAGCCGTGTGTACGTAG 3776 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 3777 ACATGCATGGCTTAATCTTTCAGACAAGCATATG-TTACTGGCAG 3820 >seq15738 Length=1555 Score = 179 bits (198), Expect = 1e-42 Identities = 140/166 (84%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 |||||||||||||||||||||||||| |||||||| |||| | | | | | |||| Sbjct 199 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAA 258 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||| ||||||||||||||||||||||||||||||||||||| | | |||||| Sbjct 259 GGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCAGCCGTGTGTACTTA 318 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 319 GACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 363 >seq11039 Length=3306 Score = 179 bits (198), Expect = 1e-42 Identities = 140/166 (84%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 |||||||||||||||||||||||||| |||||||| |||| | | | | | |||| Sbjct 119 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAA 178 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||| ||||||||||||||||||||||||||||||||||||| | | |||||| Sbjct 179 GGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCAGCCGTGTGTACTTA 238 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 239 GACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 283 >seq4873 Length=34506 Score = 154 bits (170), Expect = 4e-35 Identities = 138/168 (82%), Gaps = 10/168 (6%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 ||||| |||||||||||||||||||| |||||||| |||| | | | | | |||| Sbjct 30082 GCATGCATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGACCGACCAAA 30141 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATACT 456 ||| |||| |||||||| || |||||||||||||||||||| || || | |||| Sbjct 30142 GGAACCATAATTGATTTAAAGAACCATTCGCAGTTTCACTGTACCAGCCATG--TGTACT 30199 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 30200 TAGACATGCATGGCTTAATCTTTGAGACAGGCATATG-CTACTGGCAG 30246 Score = 136 bits (150), Expect = 1e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 93 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152 |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| | Sbjct 29776 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCCTCAGAATTGAACCCTGA 29835 Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC-CTACCATCGAAAGTTGATAGG 211 ||| ||| ||| || | ||||||||||| ||| | ||||||| ||||| ||||||| Sbjct 29836 TTCTGCGTCACCTGTGGTCACCATGGTAGG-CACAGCCACTACCATTGAAAGCTGATAGG 29894 Query 212 GCAGAAATTTGAATGAACCATCGC 235 ||||| || |||| |||||| Sbjct 29895 GCAGACGTTCAAATGGGTCATCGC 29918 >seq745 Length=552236 Score = 143 bits (158), Expect = 8e-32 Identities = 126/152 (83%), Gaps = 9/152 (6%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACT-ATCAA 397 |||||||||| ||| |||||||||||| |||||||| |||| | || ||| ||||| Sbjct 53514 AGCATGTATTTGCTTTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGACTGATCAA 53455 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATAC 455 | | | |||||| ||||||||||||||| ||||||| ||||||| || | ||| ||| Sbjct 53454 AGGAGCCATAACTAATTTAATGAGCCATTTGCAGTTTGACTGTATCAGCTGTGCATAT-- 53397 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||||||||| |||||||||||||||||||||| Sbjct 53396 TTAGACATGTATGGCTTAATCTTTGAGACAAG 53365 >seq4560 Length=289784 Score = 116 bits (128), Expect = 1e-23 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 ||| | ||||||||||||||||||||||| || ||||||||| |||||| | ||||||| Sbjct 282784 TTTATAAGGCTCCCTCTCCGGAATCGAACTCTGATTCCCCGTCACCCGTGGTCACCATGG 282843 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||||| |||||||||||||||||||||||||| || ||||| | |||||| Sbjct 282844 TAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGATGTTCGAATGGGTCGTCGCCG 282902 >seq368 Length=392250 Score = 77.0 bits (84), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 15/110 (14%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 |||| ||| ||||||||||||| || ||||| |||||||||| |||| Sbjct 303105 CAAAGGAACCATAACTGATTTAAGGATCCATTTACAGTTTCACT-------TTGCC---- 303057 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||| ||||||| |||||||||| ||| || || Sbjct 303056 ---AGACATGCATGGCTTAATATTTGAGATAAGCATATGA-TACAGGGAG 303011 >seq386 Length=690569 Score = 75.2 bits (82), Expect = 3e-11 Identities = 77/100 (77%), Gaps = 7/100 (7%) Strand=Plus/Plus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT----AGTAAGGTACTATCAAA 398 || ||||||||| ||||||| ||||| |||| ||| | || ||| || |||| Sbjct 20313 AGTATGTATTAGTTCTAGAAGCACCACAGTTACCCAAGAGAGGAGCAAGTGAC---CAAA 20369 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 ||| |||||||||||||||||||||| |||||||||| Sbjct 20370 GGAACCATAACTGATTTAATGAGCCATTTACAGTTTCACT 20409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509995635712