Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq12656 141 1e-31
seq7359 141 1e-31
seq69957 140 5e-31
seq11819 129 9e-28
seq10543 127 3e-27
seq20093 93.3 6e-17
seq2268 77.0 5e-12
seq72734 73.4 6e-11
>seq12656
Length=41293
Score = 141 bits (156), Expect = 1e-31
Identities = 180/239 (75%), Gaps = 14/239 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| || ||||| ||||| ||| |||||| |||||| |
Sbjct 351 GTACAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 408
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATT----TCAAAG 116
|||||| | | || |||| |||| ||||||||||| |||| |||| |
Sbjct 409 CTCGTTCATGGGGAATAATTACAATCCCTGATCCCCATCAC----AAATGGGGATCAATG 464
Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGC 174
||||||| || || |||| |||| | || | ||| ||| ||||||||| || |
Sbjct 465 GGTTACCCGCACATGCCGGCAAAGGGTAGGCACATGCTGAG-ACAGTCAGTGTAGTGCAC 523
Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| |||| | ||||||| |||||||||||||||||||||| ||||| || |||||
Sbjct 524 GTGCAGCCCTGGACATCTATGGGCATCACAGACCTGTTATTG-CTCAATCTCAGGTGGC 581
>seq7359
Length=110502
Score = 141 bits (156), Expect = 1e-31
Identities = 180/239 (75%), Gaps = 14/239 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| || ||||| ||||| ||| |||||| |||||| |
Sbjct 8652 GTACAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 8709
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATT----TCAAAG 116
|||||| | | || |||| |||| ||||||||||| |||| |||| |
Sbjct 8710 CTCGTTCATGGGGAATAATTACAATCCCTGATCCCCATCAC----AAATGGGGATCAATG 8765
Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGC 174
||||||| || || |||| |||| | || | ||| ||| ||||||||| || |
Sbjct 8766 GGTTACCCGCACATGCCGGCAAAGGGTAGGCACATGCTGAG-ACAGTCAGTGTAGTGCAC 8824
Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| |||| | ||||||| |||||||||||||||||||||| ||||| || |||||
Sbjct 8825 GTGCAGCCCTGGACATCTATGGGCATCACAGACCTGTTATTG-CTCAATCTCAGGTGGC 8882
>seq69957
Length=1428
Score = 140 bits (154), Expect = 5e-31
Identities = 190/257 (74%), Gaps = 10/257 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| | || ||| |||||| |||||| |
Sbjct 1051 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-AGGAGCCGCACTTACTGGGAATT-C 994
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
||| || | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 993 CTCCTTCGTGGGGAATAATTGCAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTT 934
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | |||| ||| ||| | || || ||| |||||||||||||||||
Sbjct 933 ACCAGCGCCTGCTGGCGTAGGGTAGGCACACGCTGAGC----CAGTGTAGCGCGCGTGCA 878
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||| | |||||||| ||||||||||||||||||||| ||||| || |||| |||||
Sbjct 877 GCCCCGGACATCTAATGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGG-CTAAAT 820
Query 240 GGC-CATCTCCCTCGAA 255
| | | | |||||| ||
Sbjct 819 GCCACTTGTCCCTCTAA 803
>seq11819
Length=53682
Score = 129 bits (142), Expect = 9e-28
Identities = 188/258 (73%), Gaps = 16/258 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| ||| | ||||| | | |||||| |||||| |
Sbjct 34716 GTACAAAGGGCAGGGACTTA----ACGCAAGCCT-ATGACCCACACTTACTGGGAATT-C 34663
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 34662 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGTGTT 34603
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||| | ||||| ||| | || ||| || || ||| ||||||||| ||| ||
Sbjct 34602 ACCTGCACCTGCTGGCATA--TGGTAGGCACACGCTGAGC----CAGTGTAGCACGCATG 34549
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237
| |||| | |||||||||||||||||||||||||||||| | ||| || |||||| ||
Sbjct 34548 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CACAATCTCGGGTGGCCGAA 34490
Query 238 AAGGCCATCTCCCTCGAA 255
| | | |||||| ||
Sbjct 34489 CATCACTTGTCCCTCTAA 34472
>seq10543
Length=111264
Score = 127 bits (140), Expect = 3e-27
Identities = 167/226 (74%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||| || ||||||| || ||||||| ||||| | || ||| |||||| |||||| |
Sbjct 2475 GTACAATGGACAGGGACTTAATCAACGCAAGCTT-AGGAGCCGCACTTACTGGGAATT-C 2532
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
||| || | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 2533 CTCCTTCGTGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 2592
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | |||| ||| ||| | || || ||| ||||||||| |||||||
Sbjct 2593 ACCAGCGCCTGCTGGCGTAGGGTAGGCACACGCTGAGC----CAGTGTAGCACGCGTGCA 2648
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||| | |||||||||||||||||||||||||||||| ||||| ||
Sbjct 2649 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2693
>seq20093
Length=20707
Score = 93.3 bits (102), Expect = 6e-17
Identities = 149/211 (71%), Gaps = 30/211 (14%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| |
Sbjct 5119 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTTGGAATT-C 5066
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || ||||||||| | ||||||||||||| |||| || ||
Sbjct 5065 CTCGTTCGTGGGGAATAATTGCAATCCACGATCCCCATCACGAATGGGGTTCAGAGCGTA 5006
Query 121 CCCGGACCTGTCGGC-CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|| || ||| || | || ||||| |||||||||||||||
Sbjct 5005 ---GG----GTAGGCACACGCTG--AGACT--------------GTGTAGCGCGCGTGCA 4969
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTG 210
|||| | ||||||||||||||| ||||||||
Sbjct 4968 GCCCCGGACATCTAAGGGCATCCCAGACCTG 4938
>seq2268
Length=311617
Score = 77.0 bits (84), Expect = 5e-12
Identities = 61/71 (86%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 164 GTGTAGCGC-GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222
|| || ||| |||||| |||| | |||||||||||||||||||||||||||||| |||||
Sbjct 191777 GTCTAACGCTGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA 191835
Query 223 ACTTCCGTGGC 233
||| |||||
Sbjct 191836 TCTTGGGTGGC 191846
>seq72734
Length=1281
Score = 73.4 bits (80), Expect = 6e-11
Identities = 105/144 (73%), Gaps = 7/144 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| | ||||| ||||| ||||| ||| |||||| |||| ||
Sbjct 293 GTACAAAGGGCAGGGAC----TTAACGCAAGCTT-ATGACACGCACTTACTGGGAA-TTG 346
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119
|||||| | || ||||||| | | |||||||||||| ||| || | | ||
Sbjct 347 CTCGTTCGTGGGGAATAATTGCAGTCCCCGATCCCCATCACGAATGGGATGCAACGGGTT 406
Query 120 ACCCGGACCTGTCGGCCAAGGTGA 143
|| || ||||| | || ||||||
Sbjct 407 ACTCGCACCTGCCAGCGTAGGTGA 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750692240510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |