Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq7359 89.7 3e-16
seq20093 80.6 1e-13
seq11819 71.6 8e-11
>seq7359
Length=110502
Score = 89.7 bits (98), Expect = 3e-16
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||
Sbjct 9181 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCAGGCGGGTCATGGGAATAACGCTGCCG 9240
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | |||| |||| ||||| ||| |||||||||||||||||||||||| ||
Sbjct 9241 CATCGCCAGTCAGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTTGA 9297
>seq20093
Length=20707
Score = 80.6 bits (88), Expect = 1e-13
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61
||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 4609 AACCCAAAGACTTTGGTTTCACGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCAC 4550
Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
||| | |||| ||| ||||| ||| ||||||||||||||||||||
Sbjct 4549 ATCGCGAGTCAGCAACGTTTATGGTCGGAACTACGACGGTATCTGATCG 4501
>seq11819
Length=53682
Score = 71.6 bits (78), Expect = 8e-11
Identities = 90/120 (75%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC-- 58
|||||||||||||||| |||| || ||| |||| | | |||| || | || | |||
Sbjct 34193 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGTG-GTCATAAAGGGAATAACGCTG 34135
Query 59 CCG-ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| ||| | | |||||| |||| ||| |||||||||||||| ||||||||| ||
Sbjct 34134 CCGCATCACCTGACGGCATCATTTATGGTCGGAACTACGACGGTATCCGATCGTCTTTGA 34075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277931468460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |