Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq15417 140 1e-30
seq7359 140 1e-30
seq11819 136 2e-29
seq7917 136 2e-29
seq118864 122 4e-25
seq44 113 2e-22
seq1406 100 1e-18
seq553 91.5 6e-16
seq6820 80.6 1e-12
>seq15417
Length=25066
Score = 140 bits (154), Expect = 1e-30
Identities = 112/135 (83%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| | |||| |||||||||||||| ||||||| ||||| |||| ||||
Sbjct 1573 GAGCACGAGCACACGTGTTAGGACCCGAAAGATGTTGAACTACGCCTGGGCAGGGCGAAG 1514
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || |||||| ||| ||||||||||| | ||| |
Sbjct 1513 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTAGTCCGACC 1454
Query 669 TGGGTATAGGGGCGA 683
|||||||||||||||
Sbjct 1453 TGGGTATAGGGGCGA 1439
>seq7359
Length=110502
Score = 140 bits (154), Expect = 1e-30
Identities = 103/120 (86%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 202 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGGGAAGCCAGAGGAAACTCTG 143
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || || ||| ||| |||||||||| ||||| | |||||||||||||||
Sbjct 142 GTGGAGGTCCGTAGTGGTCCTGACGTGCAAATCAGTCGTCCGACCTGGGTATAGGGGCGA 83
Score = 118 bits (130), Expect = 4e-24
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|| ||| |||| ||||||||||||| | || || | |||||||| | ||||| |||||||
Sbjct 5650 GAATCGGGTTGCTTGGGAATGCAGCCCAAAGTGTGTGGTAAATTCCATCTAAGGCTAAAT 5591
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| |||| |||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 5590 ACTGGCACAAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 5531
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || |||||||
Sbjct 5530 AGAGAGTTCAAGAGGGCGTGAAA 5508
>seq11819
Length=53682
Score = 136 bits (150), Expect = 2e-29
Identities = 101/118 (86%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 38892 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGTGCAGGGCGAAGCCAGAGGAAACTCTG 38951
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
||||||| || || ||| ||| | ||||||||| || || || |||||||||||||
Sbjct 38952 GTGGAGGTCCGTAGTGGTCCTGACATGCAAATCGGTCATCCAACCTGGGTATAGGGGC 39009
Score = 75.2 bits (82), Expect = 5e-11
Identities = 114/160 (71%), Gaps = 8/160 (5%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || || ||||| | | ||||| |||||||
Sbjct 37704 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCCGGTGGTAAGCTCCATCTAAGGCTAAAT 37763
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| |||||| | | ||||| ||||| |||||| |
Sbjct 37764 ACCGGCAGGAGACCGATAG---TCAAGTACCTTAAGGGAAAGTTGAAA---ACTTTG--A 37815
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| || || || | | ||| ||| | ||| || ||
Sbjct 37816 AGAGATTTCAAGAGAGCATAAAACCGTTAAGAGGTAAACG 37855
>seq7917
Length=101314
Score = 136 bits (150), Expect = 2e-29
Identities = 102/120 (85%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 23431 TGTTAGGACCCGAGAGATGGTGAACTATGCCTGGGCAGGGTGAAGCCAGAGAAAACTCTG 23490
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||| | | ||| | |||||||||||||||
Sbjct 23491 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATTGGTTGTCCGACCTGGGTATAGGGGCGA 23550
Score = 105 bits (116), Expect = 3e-20
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 21433 GAGTCATGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 21492
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||| | || | ||||| ||||| | |||||| |
Sbjct 21493 ACCGGCACGAGACCGATAGTCAACAAGAACTGTAAGGGAAAGTTGAAAGGAACTTTGAAG 21552
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || |||||||
Sbjct 21553 AGAGAGTTCAAGAGGGCGTGAAA 21575
>seq118864
Length=691
Score = 122 bits (134), Expect = 4e-25
Identities = 97/117 (83%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| ||||||||||||||||||||| |||| |||| ||||||||| ||||
Sbjct 166 TGTTAGGACCCAAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGTCAGAGGAAAATCTG 225
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||| | ||| || ||| ||||||||||| ||||| | ||||||||||||
Sbjct 226 GTGGAGGTCTGTAGCAGTCCTGACGTGCAAATCGGTCGTCTGACCTGGGTATAGGGG 282
>seq44
Length=1399699
Score = 113 bits (124), Expect = 2e-22
Identities = 97/120 (81%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 399858 TGTTAGGACCCAAAAGATGGTGAACTATGCCTGGGCAGGGTGAAGCCAGAGGAAACTCTC 399917
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| ||| || ||| | ||||||||| || || | |||||||| ||| ||
Sbjct 399918 GTGGAGGTCTATAGCAGTCCTGACATGCAAATCGGTCATCTGACCTGGGTATAAGGGTGA 399977
>seq1406
Length=405247
Score = 100 bits (110), Expect = 1e-18
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 371725 TGTTAGGACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCAAAGCCAGAGGAAACTCTG 371784
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
||| ||| | || ||| ||| ||||||||| || || | || ||||| ||||
Sbjct 371785 GTGAAGGTCTGTAGTGGTCCTGAAGTGCAAATCAGTCATCTGACCTGAGTATAAGGGC 371842
>seq553
Length=615063
Score = 91.5 bits (100), Expect = 6e-16
Identities = 96/125 (77%), Gaps = 1/125 (1%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| | |||| |||| | |||||||||||||||| ||||| || |||| |
Sbjct 524382 GAGCATGAGCACAA-TGTTAGGACTCAAAAGATGGTGAACTATTCCTGAGAAGAGTGATG 524324
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| | || || ||| ||||| || | || || ||
Sbjct 524323 CCAGAGGAAACTCTGGTGGAGGTCTGTAGTAGTCCTGATGTGCAGATTGGTCATCTGATC 524264
Query 669 TGGGT 673
|||||
Sbjct 524263 TGGGT 524259
>seq6820
Length=122973
Score = 80.6 bits (88), Expect = 1e-12
Identities = 80/104 (77%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
|| |||| |||||| |||||||||||||| || ||| |||| ||||||||||||||
Sbjct 73140 AGGTGTTAGGACCCAAAAGATGGTGAACTGTGGCTGGGCAGGGCAAAGCCAGAGGAAACA 73081
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664
|||||||||| | || ||| ||| | || || | ||| |||
Sbjct 73080 CTGGTGGAGGTCCTTAGAGGTCCTGACATGTGAACCCATCATCA 73037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2076149424700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |