Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq12656 208 1e-51
seq7359 208 1e-51
seq10543 196 8e-48
seq2268 192 9e-47
seq69957 187 4e-45
seq11819 178 2e-42
seq20093 174 3e-41
seq72734 143 4e-32
seq15603 134 2e-29
seq365 100 5e-19
seq7223 96.9 6e-18
seq20908 87.8 3e-15
seq5932 87.8 3e-15
seq48 84.2 3e-14
seq6697 82.4 1e-13
seq229 80.6 4e-13
>seq12656
Length=41293
Score = 208 bits (230), Expect = 1e-51
Identities = 203/257 (79%), Gaps = 17/257 (7%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||| || ||||| |||| | ||||||| ||||||||||||||||||||||| |
Sbjct 509 GTCAGTGTAGTGCACGTGCAGCCCTGGACATCTATGGGCATCACAGACCTGTTATTGC-T 567
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131
||| || | |||||| | |||| | |||||||||||||| | | || |||
Sbjct 568 CAATCT-CAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGC- 625
Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183
||| |||| ||| |||||| | | ||||| |||||||||||||||||||
Sbjct 626 -TCG--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCATTCGTTATCGGAATTAACC 682
Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243
||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||||
Sbjct 683 AGACAAATCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCACGGAATCGAGAAAG 742
Query 244 AGCTATCAATCTGTCCT 260
||||||| || |||||
Sbjct 743 AGCTATCTGTCAGTCCT 759
>seq7359
Length=110502
Score = 208 bits (230), Expect = 1e-51
Identities = 203/257 (79%), Gaps = 17/257 (7%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||| || ||||| |||| | ||||||| ||||||||||||||||||||||| |
Sbjct 8810 GTCAGTGTAGTGCACGTGCAGCCCTGGACATCTATGGGCATCACAGACCTGTTATTGC-T 8868
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131
||| || | |||||| | |||| | |||||||||||||| | | || |||
Sbjct 8869 CAATCT-CAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGC- 8926
Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183
||| |||| ||| |||||| | | ||||| |||||||||||||||||||
Sbjct 8927 -TCG--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCATTCGTTATCGGAATTAACC 8983
Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243
||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||||
Sbjct 8984 AGACAAATCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCACGGAATCGAGAAAG 9043
Query 244 AGCTATCAATCTGTCCT 260
||||||| || |||||
Sbjct 9044 AGCTATCTGTCAGTCCT 9060
>seq10543
Length=111264
Score = 196 bits (216), Expect = 8e-48
Identities = 197/250 (79%), Gaps = 11/250 (4%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||| |||
Sbjct 2631 CAGTGTAGCACGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 2689
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC--CATA 131
| || | ||| || | |||| | |||||||||| ||| || | || | |
Sbjct 2690 ATCT-CGGGTGGTTGAATGCCACTTGTCCCTCTAAAAAGTTGGCGGATGCTGACTGCTTG 2748
Query 132 G---TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188
| ||| || | | || ||| | | ||||| ||| |||| |||||||||||||||
Sbjct 2749 GGGGTCG-TGTAACCAGTTGGCATGCCAGAGTCTCCTTCATTATTGGAATTAACCAGACA 2807
Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248
|||| ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||
Sbjct 2808 AATCGCTCCACCAACTAAGAACGGCCATGCCCCACCACCCACGGAATCGAGAAAGAGCTA 2867
Query 249 TCAATCTGTC 258
||||||||||
Sbjct 2868 TCAATCTGTC 2877
>seq2268
Length=311617
Score = 192 bits (212), Expect = 9e-47
Identities = 188/237 (79%), Gaps = 18/237 (8%)
Strand=Plus/Plus
Query 19 GTGTAGCGC-GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77
|| || ||| |||||| |||| | ||||||||||||||||||||||||||||||| ||||
Sbjct 191777 GTCTAACGCTGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCAA 191835
Query 78 ACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATAGTC 134
||| | ||||| | |||| | |||||||||||||| | | ||||| | ||
Sbjct 191836 TCTTGGGT-GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCAAC--TGCTC 191892
Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
| |||| ||| |||||| | || ||||| ||||||||||||||||| ||||
Sbjct 191893 G--GGGGTCGCGTAACTAGTTAGCATGCTAGAGTCTCATTCGTTATCGGAATTAAACAGA 191950
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243
|||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 191951 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAG 192007
>seq69957
Length=1428
Score = 187 bits (206), Expect = 4e-45
Identities = 196/250 (78%), Gaps = 12/250 (5%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| |||
Sbjct 895 CAGTGTAGCGCGCGTGCAGCCCCGGACATCTAATGGCATCACAGACCTGTTATTGC-TCA 837
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC---CAGCCACCAAC--CATA 131
| || | ||||| | |||| | |||||||||| ||| | | | || | |
Sbjct 836 ATCT-CGGGTGGCTAAATGCCACTTGTCCCTCTAAAAAGTTGACGGATGCTGACTGCTTG 778
Query 132 G---TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188
| ||| || ||| || ||| | | ||||| ||| |||| |||||||||||||||
Sbjct 777 GGGGTCG-TGTAACTAGTTGGCATGCCAGAGTCTCCTTCATTATTGGAATTAACCAGACA 719
Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248
|||| ||||| ||||||||||| ||||||| |||||||||| ||||| |||||||||||
Sbjct 718 AATC-CTCCAACAACTAAGAACAGCCATGCCCCACCACCCACGGAATCGAGAAAGAGCTA 660
Query 249 TCAATCTGTC 258
||||||||||
Sbjct 659 TCAATCTGTC 650
>seq11819
Length=53682
Score = 178 bits (196), Expect = 2e-42
Identities = 194/251 (77%), Gaps = 15/251 (6%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||| ||| ||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 34564 CAGTGTAGCACGCATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCA-CA 34506
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACC----- 128
| || | |||| | | || | |||||||||||||| | | || |||
Sbjct 34505 ATCT-CGGGTGGCCGAACATCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTCA 34447
Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188
| ||| | | ||| |||||| | | ||||||||| ||||||||||||||||||||
Sbjct 34446 AGGGTC-ACGTAACTAGTTAGCATGCCAGAGTCTCGTTCCTTATCGGAATTAACCAGACA 34388
Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248
|| | | ||| |||||||| ||||||||||||||||||| |||||| |||||||||||
Sbjct 34387 AACCGCCCCA---ACTAAGAAAGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTA 34331
Query 249 T-CAATCTGTC 258
| |||||||||
Sbjct 34330 TCCAATCTGTC 34320
>seq20093
Length=20707
Score = 174 bits (192), Expect = 3e-41
Identities = 195/258 (76%), Gaps = 21/258 (8%)
Strand=Plus/Minus
Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT-------TATT- 70
||||||||||||||| |||| | ||||||||||||||| |||||||| | ||
Sbjct 4984 GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCCCAGACCTGCCCAGACCTGTTA 4925
Query 71 -GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA 129
| ||||| || | ||||| | | || | |||||||||| ||| | | || |
Sbjct 4924 AGGCTCAATCT-CGGGTGGCTAAACGGCACTTGTCCCTCTAACAAGTTGGTGGACGACGA 4866
Query 130 TAG-TCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| |||| ||| ||||| | | ||||||||||||||||||||||
Sbjct 4865 CCGCTCG--GGGGTCGCCTAACTAGATAGCATGCCAGAGTCTCGTTCGTTATCGGAATTA 4808
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
|||||||||||| ||||| ||||||||||| | |||||||||||||||| |||||| |||
Sbjct 4807 ACCAGACAAATCGCTCCATCAACTAAGAACAGACATGCACCACCACCCACAGAATCGAGA 4748
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 4747 AAGAGCTATCAATCTGTC 4730
>seq72734
Length=1281
Score = 143 bits (158), Expect = 4e-32
Identities = 192/262 (73%), Gaps = 30/262 (11%)
Strand=Plus/Plus
Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA----------GACCTGTTA 68
||| | ||||||||| |||| | |||| |||||||||| || |||||||||
Sbjct 427 GTGAAACGCGCGTGCAGCCCTGGACATTTAAGGGCATCCCATACCTGCCCAGACCTGTTA 486
Query 69 TTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCA 125
|| |||| || | ||||| | | || | ||||||| |||||| | ||||
Sbjct 487 GGGC-TCAATCT-CGGGTGGCTAAACGGCACTTGTCCCTCCAAGAAGTTGGGGGACACCG 544
Query 126 ACCATAGTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
||| || ||||| ||| |||||| | | | |||||||||||||| ||
Sbjct 545 ACCGC--TC--TGGGGTCGCCTAACTAGTTAGCATGCCA--GACTCGTTCGTTATCGCAA 598
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCC-ATGCACCACCACCCATAGAATC 236
| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||
Sbjct 599 TCAACCAGACAAATCGCTCCATCAACTAAGAACGGCCAATGCACCACCACCCACGTAATC 658
Query 237 AAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||
Sbjct 659 GAGAAAGAGCTATCAATCTGTC 680
>seq15603
Length=24276
Score = 134 bits (148), Expect = 2e-29
Identities = 100/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||| || | | |||||||||||||||| ||||| |
Sbjct 4627 CTAGTTAGCATGCCAGAGTCTCGTTCGCTAACAGGATTAACCAGACAAATCGCTCCATAA 4686
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct 4687 ACTAAGAACGGCCATGCACCACCACCCACGGCATCGAGAAAGAGCTATCAATCTGTC 4743
>seq365
Length=710278
Score = 100 bits (110), Expect = 5e-19
Identities = 69/78 (88%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
|||||||| || ||| |||||||||||| |||||||| ||||||||| |||||| |||
Sbjct 273259 ACCAGACAGATTGCTCTACCAACTAAGAATGGCCATGCGGCACCACCCACAGAATCGAGA 273318
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 273319 AAGAGCTATCAATCTGTC 273336
>seq7223
Length=113186
Score = 96.9 bits (106), Expect = 6e-18
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||| |||||||||| ||||||||||||||||| ||||||||
Sbjct 78995 CTAGTTAGCATGCCAGAGTCTTGTTCGTTATCAGAATTAACCAGACAAATTGCTCCACCA 78936
Query 202 ACTAAGAACGGCCATGCA 219
||||||||||||||||||
Sbjct 78935 ACTAAGAACGGCCATGCA 78918
>seq20908
Length=12783
Score = 87.8 bits (96), Expect = 3e-15
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 8867 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAATCACTCCACCA 8808
Query 202 ACTAAGAACGGCCATGCA 219
| |||||| | ||||||
Sbjct 8807 AAAAAGAACAG-CATGCA 8791
>seq5932
Length=146223
Score = 87.8 bits (96), Expect = 3e-15
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 26174 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAATCACTCCACCA 26115
Query 202 ACTAAGAACGGCCATGCA 219
| |||||| | ||||||
Sbjct 26114 AAAAAGAACAG-CATGCA 26098
>seq48
Length=1473269
Score = 84.2 bits (92), Expect = 3e-14
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | ||||| || ||||||||||||||||||||||||| ||||||||
Sbjct 456929 CTAGTTAGCATGCCAGAGTCTCATTTGTTATCGGAATTAACCAGACAAATCGCTCCACCA 456988
Query 202 ACTAAGAACGGCCATGCA 219
|| ||||| || ||||||
Sbjct 456989 ACAAAGAATGG-CATGCA 457005
>seq6697
Length=124389
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | ||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct 7854 CTAGTTAGCATGCCAGACTCTTGTTCGTTATTGGAATTAACCAGACAAATCGCTCCACCA 7913
Query 202 ACTAAGAACGGCCAT 216
|||||||| ||| ||
Sbjct 7914 ACTAAGAATGGCAAT 7928
>seq229
Length=901305
Score = 80.6 bits (88), Expect = 4e-13
Identities = 49/52 (94%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210
|||||||| ||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 621139 GTCTCGTTTGTTATCGTAATTAACCAGACAAATCGCTCCACCAACTAAGAAC 621088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795414331434
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |