Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12656 208 1e-51 seq7359 208 1e-51 seq10543 196 8e-48 seq2268 192 9e-47 seq69957 187 4e-45 seq11819 178 2e-42 seq20093 174 3e-41 seq72734 143 4e-32 seq15603 134 2e-29 seq365 100 5e-19 seq7223 96.9 6e-18 seq20908 87.8 3e-15 seq5932 87.8 3e-15 seq48 84.2 3e-14 seq6697 82.4 1e-13 seq229 80.6 4e-13 >seq12656 Length=41293 Score = 208 bits (230), Expect = 1e-51 Identities = 203/257 (79%), Gaps = 17/257 (7%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || ||||| |||| | ||||||| ||||||||||||||||||||||| | Sbjct 509 GTCAGTGTAGTGCACGTGCAGCCCTGGACATCTATGGGCATCACAGACCTGTTATTGC-T 567 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131 ||| || | |||||| | |||| | |||||||||||||| | | || ||| Sbjct 568 CAATCT-CAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGC- 625 Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 ||| |||| ||| |||||| | | ||||| ||||||||||||||||||| Sbjct 626 -TCG--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCATTCGTTATCGGAATTAACC 682 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct 683 AGACAAATCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCACGGAATCGAGAAAG 742 Query 244 AGCTATCAATCTGTCCT 260 ||||||| || ||||| Sbjct 743 AGCTATCTGTCAGTCCT 759 >seq7359 Length=110502 Score = 208 bits (230), Expect = 1e-51 Identities = 203/257 (79%), Gaps = 17/257 (7%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || ||||| |||| | ||||||| ||||||||||||||||||||||| | Sbjct 8810 GTCAGTGTAGTGCACGTGCAGCCCTGGACATCTATGGGCATCACAGACCTGTTATTGC-T 8868 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131 ||| || | |||||| | |||| | |||||||||||||| | | || ||| Sbjct 8869 CAATCT-CAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGC- 8926 Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 ||| |||| ||| |||||| | | ||||| ||||||||||||||||||| Sbjct 8927 -TCG--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCATTCGTTATCGGAATTAACC 8983 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct 8984 AGACAAATCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCACGGAATCGAGAAAG 9043 Query 244 AGCTATCAATCTGTCCT 260 ||||||| || ||||| Sbjct 9044 AGCTATCTGTCAGTCCT 9060 >seq10543 Length=111264 Score = 196 bits (216), Expect = 8e-48 Identities = 197/250 (79%), Gaps = 11/250 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 2631 CAGTGTAGCACGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 2689 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC--CATA 131 | || | ||| || | |||| | |||||||||| ||| || | || | | Sbjct 2690 ATCT-CGGGTGGTTGAATGCCACTTGTCCCTCTAAAAAGTTGGCGGATGCTGACTGCTTG 2748 Query 132 G---TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | ||| || | | || ||| | | ||||| ||| |||| ||||||||||||||| Sbjct 2749 GGGGTCG-TGTAACCAGTTGGCATGCCAGAGTCTCCTTCATTATTGGAATTAACCAGACA 2807 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct 2808 AATCGCTCCACCAACTAAGAACGGCCATGCCCCACCACCCACGGAATCGAGAAAGAGCTA 2867 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 2868 TCAATCTGTC 2877 >seq2268 Length=311617 Score = 192 bits (212), Expect = 9e-47 Identities = 188/237 (79%), Gaps = 18/237 (8%) Strand=Plus/Plus Query 19 GTGTAGCGC-GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 || || ||| |||||| |||| | ||||||||||||||||||||||||||||||| |||| Sbjct 191777 GTCTAACGCTGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCAA 191835 Query 78 ACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATAGTC 134 ||| | ||||| | |||| | |||||||||||||| | | ||||| | || Sbjct 191836 TCTTGGGT-GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCAAC--TGCTC 191892 Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | |||| ||| |||||| | || ||||| ||||||||||||||||| |||| Sbjct 191893 G--GGGGTCGCGTAACTAGTTAGCATGCTAGAGTCTCATTCGTTATCGGAATTAAACAGA 191950 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 |||||| |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 191951 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAG 192007 >seq69957 Length=1428 Score = 187 bits (206), Expect = 4e-45 Identities = 196/250 (78%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| ||| Sbjct 895 CAGTGTAGCGCGCGTGCAGCCCCGGACATCTAATGGCATCACAGACCTGTTATTGC-TCA 837 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC---CAGCCACCAAC--CATA 131 | || | ||||| | |||| | |||||||||| ||| | | | || | | Sbjct 836 ATCT-CGGGTGGCTAAATGCCACTTGTCCCTCTAAAAAGTTGACGGATGCTGACTGCTTG 778 Query 132 G---TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | ||| || ||| || ||| | | ||||| ||| |||| ||||||||||||||| Sbjct 777 GGGGTCG-TGTAACTAGTTGGCATGCCAGAGTCTCCTTCATTATTGGAATTAACCAGACA 719 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| ||||| ||||||||||| ||||||| |||||||||| ||||| ||||||||||| Sbjct 718 AATC-CTCCAACAACTAAGAACAGCCATGCCCCACCACCCACGGAATCGAGAAAGAGCTA 660 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 659 TCAATCTGTC 650 >seq11819 Length=53682 Score = 178 bits (196), Expect = 2e-42 Identities = 194/251 (77%), Gaps = 15/251 (6%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||| ||| ||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 34564 CAGTGTAGCACGCATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCA-CA 34506 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACC----- 128 | || | |||| | | || | |||||||||||||| | | || ||| Sbjct 34505 ATCT-CGGGTGGCCGAACATCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTCA 34447 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | ||| | | ||| |||||| | | ||||||||| |||||||||||||||||||| Sbjct 34446 AGGGTC-ACGTAACTAGTTAGCATGCCAGAGTCTCGTTCCTTATCGGAATTAACCAGACA 34388 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 || | | ||| |||||||| ||||||||||||||||||| |||||| ||||||||||| Sbjct 34387 AACCGCCCCA---ACTAAGAAAGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTA 34331 Query 249 T-CAATCTGTC 258 | ||||||||| Sbjct 34330 TCCAATCTGTC 34320 >seq20093 Length=20707 Score = 174 bits (192), Expect = 3e-41 Identities = 195/258 (76%), Gaps = 21/258 (8%) Strand=Plus/Minus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT-------TATT- 70 ||||||||||||||| |||| | ||||||||||||||| |||||||| | || Sbjct 4984 GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCCCAGACCTGCCCAGACCTGTTA 4925 Query 71 -GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA 129 | ||||| || | ||||| | | || | |||||||||| ||| | | || | Sbjct 4924 AGGCTCAATCT-CGGGTGGCTAAACGGCACTTGTCCCTCTAACAAGTTGGTGGACGACGA 4866 Query 130 TAG-TCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| |||| ||| ||||| | | |||||||||||||||||||||| Sbjct 4865 CCGCTCG--GGGGTCGCCTAACTAGATAGCATGCCAGAGTCTCGTTCGTTATCGGAATTA 4808 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||| ||||| ||||||||||| | |||||||||||||||| |||||| ||| Sbjct 4807 ACCAGACAAATCGCTCCATCAACTAAGAACAGACATGCACCACCACCCACAGAATCGAGA 4748 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 4747 AAGAGCTATCAATCTGTC 4730 >seq72734 Length=1281 Score = 143 bits (158), Expect = 4e-32 Identities = 192/262 (73%), Gaps = 30/262 (11%) Strand=Plus/Plus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA----------GACCTGTTA 68 ||| | ||||||||| |||| | |||| |||||||||| || ||||||||| Sbjct 427 GTGAAACGCGCGTGCAGCCCTGGACATTTAAGGGCATCCCATACCTGCCCAGACCTGTTA 486 Query 69 TTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCA 125 || |||| || | ||||| | | || | ||||||| |||||| | |||| Sbjct 487 GGGC-TCAATCT-CGGGTGGCTAAACGGCACTTGTCCCTCCAAGAAGTTGGGGGACACCG 544 Query 126 ACCATAGTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 ||| || ||||| ||| |||||| | | | |||||||||||||| || Sbjct 545 ACCGC--TC--TGGGGTCGCCTAACTAGTTAGCATGCCA--GACTCGTTCGTTATCGCAA 598 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCC-ATGCACCACCACCCATAGAATC 236 | ||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||| Sbjct 599 TCAACCAGACAAATCGCTCCATCAACTAAGAACGGCCAATGCACCACCACCCACGTAATC 658 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| Sbjct 659 GAGAAAGAGCTATCAATCTGTC 680 >seq15603 Length=24276 Score = 134 bits (148), Expect = 2e-29 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||||||||| || | | |||||||||||||||| ||||| | Sbjct 4627 CTAGTTAGCATGCCAGAGTCTCGTTCGCTAACAGGATTAACCAGACAAATCGCTCCATAA 4686 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct 4687 ACTAAGAACGGCCATGCACCACCACCCACGGCATCGAGAAAGAGCTATCAATCTGTC 4743 >seq365 Length=710278 Score = 100 bits (110), Expect = 5e-19 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||| || ||| |||||||||||| |||||||| ||||||||| |||||| ||| Sbjct 273259 ACCAGACAGATTGCTCTACCAACTAAGAATGGCCATGCGGCACCACCCACAGAATCGAGA 273318 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 273319 AAGAGCTATCAATCTGTC 273336 >seq7223 Length=113186 Score = 96.9 bits (106), Expect = 6e-18 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| |||||||||| ||||||||||||||||| |||||||| Sbjct 78995 CTAGTTAGCATGCCAGAGTCTTGTTCGTTATCAGAATTAACCAGACAAATTGCTCCACCA 78936 Query 202 ACTAAGAACGGCCATGCA 219 |||||||||||||||||| Sbjct 78935 ACTAAGAACGGCCATGCA 78918 >seq20908 Length=12783 Score = 87.8 bits (96), Expect = 3e-15 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||||||||||||| |||||||||||||||||||||||||||| Sbjct 8867 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAATCACTCCACCA 8808 Query 202 ACTAAGAACGGCCATGCA 219 | |||||| | |||||| Sbjct 8807 AAAAAGAACAG-CATGCA 8791 >seq5932 Length=146223 Score = 87.8 bits (96), Expect = 3e-15 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||||||||||||| |||||||||||||||||||||||||||| Sbjct 26174 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAATCACTCCACCA 26115 Query 202 ACTAAGAACGGCCATGCA 219 | |||||| | |||||| Sbjct 26114 AAAAAGAACAG-CATGCA 26098 >seq48 Length=1473269 Score = 84.2 bits (92), Expect = 3e-14 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | ||||| || ||||||||||||||||||||||||| |||||||| Sbjct 456929 CTAGTTAGCATGCCAGAGTCTCATTTGTTATCGGAATTAACCAGACAAATCGCTCCACCA 456988 Query 202 ACTAAGAACGGCCATGCA 219 || ||||| || |||||| Sbjct 456989 ACAAAGAATGG-CATGCA 457005 >seq6697 Length=124389 Score = 82.4 bits (90), Expect = 1e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | ||| ||||||||| ||||||||||||||||||| |||||||| Sbjct 7854 CTAGTTAGCATGCCAGACTCTTGTTCGTTATTGGAATTAACCAGACAAATCGCTCCACCA 7913 Query 202 ACTAAGAACGGCCAT 216 |||||||| ||| || Sbjct 7914 ACTAAGAATGGCAAT 7928 >seq229 Length=901305 Score = 80.6 bits (88), Expect = 4e-13 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 |||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 621139 GTCTCGTTTGTTATCGTAATTAACCAGACAAATCGCTCCACCAACTAAGAAC 621088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795414331434