Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq69957 77.0 2e-12 seq12656 77.0 2e-12 seq7359 77.0 2e-12 >seq69957 Length=1428 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || |||||| || ||||| || ||||||||||||||||||| Sbjct 1091 CTCACTAAACCATC-CAATCAGTAGTA-GCAACGGGTGGTGTGTACAAAGGGCAGGGACT 1034 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1033 TAAT-CAACGCAAGCT 1019 >seq12656 Length=41293 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| | |||| || || |||||| ||||||||||| ||||||||||||||||||| Sbjct 311 CTCACTCAACCATC-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 368 Query 109 TAATACAACGCAAGCT 124 |||| ||| ||||||| Sbjct 369 TAAT-CAATGCAAGCT 383 >seq7359 Length=110502 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| | |||| || || |||||| ||||||||||| ||||||||||||||||||| Sbjct 8612 CTCACTCAACCATC-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 8669 Query 109 TAATACAACGCAAGCT 124 |||| ||| ||||||| Sbjct 8670 TAAT-CAATGCAAGCT 8684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300293770520