Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq11819 105 7e-21 seq7359 96.9 4e-18 >seq11819 Length=53682 Score = 105 bits (116), Expect = 7e-21 Identities = 133/179 (74%), Gaps = 9/179 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTA---GAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTAC 66 |||||||||||||||||| ||| |||||||||||||| || | |||||| | Sbjct 33828 TTTACTTTGAAAAAATTAGAGGAGTGTTCAAAGCAGGCCCGAGCCCCCTGAATACCGCAG 33887 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 | |||||||| ||||||||| |||||||||||||||| |||||| ||| | | | Sbjct 33888 CTAGGAATAATGGAATAGGAC-TGCGGTTCTATTTTGTTGGTTTC--GGAACTGAGGCCA 33944 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | ||| | |||||| | ||||| | | | |||||||||||||||| Sbjct 33945 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCACCGCTAGAGGTGAAATTCTTGGA 34003 >seq7359 Length=110502 Score = 96.9 bits (106), Expect = 4e-18 Identities = 129/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| | | | |||| ||| Sbjct 9544 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAAGCCACCTGGATACCGCACCTA 9485 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 | |||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 9484 GAAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 9427 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 9426 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 9371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511109610560