Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq12656 161 2e-37
seq7359 161 2e-37
seq69957 152 1e-34
seq10543 143 5e-32
seq11819 129 1e-27
seq20093 98.7 2e-18
seq2268 82.4 1e-13
seq72734 80.6 5e-13
>seq12656
Length=41293
Score = 161 bits (178), Expect = 2e-37
Identities = 193/258 (75%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 607 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 550
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||| ||||||| | |||| ||||| || |||||||||| | || | || | |
Sbjct 549 ATGCCCATAGATGTCCAGGGCTGCACGTGCACTACACTGACTGTCTCAGCATGTGCCTAC 490
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| ||||| | || |||||| | | | | | | ||| ||||||| | ||||
Sbjct 489 CCTTTGCCGGCATGTGCGGGTAACCCATTGATCCCCATTTGTGATGGGGATCAGGGATTG 430
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| || |||||| ||| ||||| ||| || ||||||
Sbjct 429 TAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCATTGATT 370
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 369 AAGTCCCTGCCCTTTGTA 352
>seq7359
Length=110502
Score = 161 bits (178), Expect = 2e-37
Identities = 193/258 (75%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 8908 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 8851
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||| ||||||| | |||| ||||| || |||||||||| | || | || | |
Sbjct 8850 ATGCCCATAGATGTCCAGGGCTGCACGTGCACTACACTGACTGTCTCAGCATGTGCCTAC 8791
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| ||||| | || |||||| | | | | | | ||| ||||||| | ||||
Sbjct 8790 CCTTTGCCGGCATGTGCGGGTAACCCATTGATCCCCATTTGTGATGGGGATCAGGGATTG 8731
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| || |||||| ||| ||||| ||| || ||||||
Sbjct 8730 TAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCATTGATT 8671
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 8670 AAGTCCCTGCCCTTTGTA 8653
>seq69957
Length=1428
Score = 152 bits (168), Expect = 1e-34
Identities = 191/258 (74%), Gaps = 7/258 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||| |||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 799 CTTTTTAGAGGGACAAGTGGCATTTAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 856
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||| |||||||| | |||| ||||||||||||||||| | ||| | || | |
Sbjct 857 ATGCCATTAGATGTCCGGGGCTGCACGCGCGCTACACTGGCTCAGC----GTGTGCCTAC 912
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||| | ||| ||||| | | || | | ||||| ||||||| | | ||||
Sbjct 913 CCTACGCCAGCAGGCGCTGGTAACCCGTTGAACCCCATTCGTGATGGGGATTGGGGATTG 972
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | || ||||||| || |||||| ||| || | ||| |||||||||
Sbjct 973 CAATTATTCCCCACGAAGGAGGAATTCCCAGTAAGTGCGGCTCCTAAGCTTGCGTTGATT 1032
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 1033 AAGTCCCTGCCCTTTGTA 1050
>seq10543
Length=111264
Score = 143 bits (158), Expect = 5e-32
Identities = 193/265 (73%), Gaps = 9/265 (3%)
Strand=Plus/Minus
Query 66 CGCCGGCTTCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAG 123
|||| ||| |||||||||| | ||| |||| | | || ||||| |||||||||
Sbjct 2733 CGCCAACTTTTTAGAGGGACAAGTGGCATTCAACCACCCG--AGATTGAG-CAATAACAG 2677
Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183
||||||||||||||||||||| | |||| ||||||| ||||||||| | || || |
Sbjct 2676 GTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGTGCTACACTGGC----TCAGCGTG 2621
Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243
| | | ||| ||| | ||| ||||| | | || | | ||||| ||||||| |
Sbjct 2620 TGCCTACCCTACGCCAGCAGGCGCTGGTAACCCGTTGAACCCCATTCGTGATGGGGATCG 2561
Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303
| |||||||||||| | | || ||||||| || |||||| ||| || | ||| ||
Sbjct 2560 GGGATTGCAATTATTCCCCACGAAGGAGGAATTCCCAGTAAGTGCGGCTCCTAAGCTTGC 2501
Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328
|||||||| ||||||| || |||||
Sbjct 2500 GTTGATTAAGTCCCTGTCCATTGTA 2476
>seq11819
Length=53682
Score = 129 bits (142), Expect = 1e-27
Identities = 158/215 (73%), Gaps = 8/215 (4%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||||||||||||||||| | |||| ||| ||| ||||||||| |
Sbjct 34509 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCATGCGTGCTACACTGGC-- 34566
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|| || || | | | | ||| | |||| ||||| | || | | |||||
Sbjct 34567 --TCAGCGTGTGCCTACCATATGCCAGCAGGTGCAGGTAACACATTGAACCCCATTCGTG 34624
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
||||||| | | |||||||||||| | | | |||||||||| || |||||| | | |||
Sbjct 34625 ATGGGGATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGTGGGTC 34684
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||| ||| ||||||||||||||||
Sbjct 34685 ATAGGCTTGCG----TTAAGTCCCTGCCCTTTGTA 34715
>seq20093
Length=20707
Score = 98.7 bits (108), Expect = 2e-18
Identities = 145/208 (70%), Gaps = 27/208 (13%)
Strand=Plus/Plus
Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC 180
|||||||| ||||||||||||||| | |||| ||||||||||||||| | | |||
Sbjct 4938 CAGGTCTGGGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACAGTCTCAGC---- 4993
Query 181 GAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240
| || | | ||| || |||| || | | ||||| ||||||
Sbjct 4994 GTGTGCCTACCCTACGC-------TCTG------------AACCCCATTCGTGATGGGGA 5034
Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300
| | | |||||||||||| | | |||||||||| || |||||| ||| ||||| |||
Sbjct 5035 TCGTGGATTGCAATTATTCCCCACGAACGAGGAATTCCAAGTAAGTGCGGGTCATAAGCT 5094
Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| ||| ||||||||||||||||
Sbjct 5095 TGCG----TTAAGTCCCTGCCCTTTGTA 5118
>seq2268
Length=311617
Score = 82.4 bits (90), Expect = 1e-13
Identities = 80/98 (82%), Gaps = 4/98 (4%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | ||| ||||| ||||||||||||||||
Sbjct 191872 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACCCAAGATTGAG-CAATAACAGGTCTGTG 191815
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGC-GCGCTACAC 167
|||||||||||||| | |||| |||||| ||| || ||
Sbjct 191814 ATGCCCTTAGATGTCCGGGGCTGCACGCAGCGTTAGAC 191777
>seq72734
Length=1281
Score = 80.6 bits (88), Expect = 5e-13
Identities = 78/100 (78%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| ||||||| | | | |||||||||| | | |||||| ||| || |||||| ||
Sbjct 389 TCGTGATGGGGATCGGGGACTGCAATTATTCCCCACGAACGAGCAATTCCCAGTAAGTGC 330
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||||| ||| ||||| | ||||||||||||||||
Sbjct 329 GTGTCATAAGCTTGCGTTAA----GTCCCTGCCCTTTGTA 294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945499643392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |