Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq7917 104 4e-20
seq3961 98.7 2e-18
>seq7917
Length=101314
Score = 104 bits (114), Expect = 4e-20
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | | | || |||| || || |
Sbjct 29714 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTAGGTGCTTGGCTGAGGAGCCAAT 29771
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||| |||||||| |||||||||||||||||||||||| | |||
Sbjct 29772 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCTCCCA 29831
Query 121 G 121
|
Sbjct 29832 G 29832
Score = 77.0 bits (84), Expect = 5e-12
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| |||||||||||| |||||| | ||| | | || | || |||| || || |
Sbjct 32568 GTATGAGAGGAACCGCATG-TTCAGAC-ATTTGCTGTATGTGCTTGGCTGAGGAGCCAAT 32625
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| | ||||||||| |||| |||||||| ||||| ||||||||||||||||||
Sbjct 32626 GGGGTGAAGCTACCTTCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 32679
>seq3961
Length=209076
Score = 98.7 bits (108), Expect = 2e-18
Identities = 93/115 (81%), Gaps = 3/115 (3%)
Strand=Plus/Minus
Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64
|||||||||||| | |||||| | ||||| | || | || |||| || | ||| |
Sbjct 164969 GAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCCGTGGGG 164912
Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
||||||||||||||| |||||||| |||||||||||||||||||||||| ||||
Sbjct 164911 CGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC-TGCC 164858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 817775376896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |