Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7917 104 4e-20 seq3961 98.7 2e-18 >seq7917 Length=101314 Score = 104 bits (114), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | | | || |||| || || | Sbjct 29714 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTAGGTGCTTGGCTGAGGAGCCAAT 29771 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| | ||| Sbjct 29772 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCTCCCA 29831 Query 121 G 121 | Sbjct 29832 G 29832 Score = 77.0 bits (84), Expect = 5e-12 Identities = 87/114 (76%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||||||| |||||| | ||| | | || | || |||| || || | Sbjct 32568 GTATGAGAGGAACCGCATG-TTCAGAC-ATTTGCTGTATGTGCTTGGCTGAGGAGCCAAT 32625 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | | ||||||||| |||| |||||||| ||||| |||||||||||||||||| Sbjct 32626 GGGGTGAAGCTACCTTCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 32679 >seq3961 Length=209076 Score = 98.7 bits (108), Expect = 2e-18 Identities = 93/115 (81%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 |||||||||||| | |||||| | ||||| | || | || |||| || | ||| | Sbjct 164969 GAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCCGTGGGG 164912 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 ||||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct 164911 CGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC-TGCC 164858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817775376896