Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7635 107 2e-18
seq103498 98.7 8e-16
seq2256 89.7 4e-13
>seq7635
Length=151111
Score = 107 bits (118), Expect = 2e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || || |||| |||| ||
Sbjct 110280 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCACTTGATCGTTCCCAGGTTCTTCTG 110339
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 110340 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 110399
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 110400 AGACTCAATGATGGCATACCAAAG 110423
Score = 84.2 bits (92), Expect = 2e-11
Identities = 116/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 65695 CTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCG 65754
||||||||| || | |||||||| || || || || ||||||| || || || || |
Sbjct 100007 CTCCTTGGCCAGGTCACAGCTGGCTTCCAGGGCTCCATAATAAATAGTTTCAAAGATTTG 100066
Query 65755 TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CATCAGGACAAAAGTGT 65813
||| ||| | ||||| ||||| | || ||| | |||||||| ||||| |
Sbjct 100067 CTTATTCAGTAACTGGGCCTCTGGACTCTCAAAAGG-ATATCTCATCAGGATAAAAGCAT 100125
Query 65814 CGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853
| ||||||||||| || ||||| || ||||||||||| ||
Sbjct 100126 CTGCCAGACCTTGTACCCCAATTCCAATGGGACGATGGCG 100165
>seq103498
Length=782
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 605 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 546
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 545 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 499
>seq2256
Length=312150
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| ||||||||||| ||| | || | |||| ||||| ||
Sbjct 308484 GGTATACTCTACTATTTCTGTGCACAGATTGCTGTATTTGATCCTTCCCAGGTTCTGCTG 308543
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||| | | |||||||| || | ||||| ||
Sbjct 308544 GTTGCTCTTCCGATTACAGGAATCTTTGCAGAGTATGTACGGGGTACGTGTCTCTGTCTG 308603
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| ||||||
Sbjct 308604 AGACTCAATGATGGCAGACCAAAG 308627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396698190044960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |