Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq860 149 3e-33
seq126 149 3e-33
seq377 131 7e-28
seq1 120 1e-24
seq638 107 8e-21
seq219 93.3 2e-16
seq23939 87.8 7e-15
seq187 80.6 1e-12
>seq860
Length=57935654
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 23665518 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 23665459
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 23665458 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 23665399
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 23666739 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 23666680
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 23666679 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 23666620
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 23666619 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 23666580
>seq126
Length=135448346
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 24203087 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 24203028
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 24203027 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 24202968
>seq377
Length=146757320
Score = 131 bits (144), Expect = 7e-28
Identities = 101/120 (84%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| |||||||||||||| ||||||| |||| |||||||||||| ||||||
Sbjct 59962021 TGTTAGGACCCCAAAGATGGTGAACTGTGCCTGAGGAGGGCGAAGCCAGAGGACACTCTG 59962080
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || || || ||| |||||||||| |||||| | |||||||||||||||
Sbjct 59962081 GTGGAGGTCCGTTGCAGTGCTGTCGTGCAAATCCATCGTCCGACCTGGGTATAGGGGCGA 59962140
Score = 104 bits (114), Expect = 1e-19
Identities = 102/131 (78%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| || |||| ||| ||||||| |||||||||||||| | | |||||
Sbjct 47116688 GAGCATGAGCACAGGTGTTAGGAAATGAAAGATTGTGAACTATGCCTGGGCAAGATGAAG 47116747
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||| |||||||||| |||| ||| ||| | |||||||||| ||| ||
Sbjct 47116748 CCAGAGGAAA--CTGGTGGAGGTCCGCAATGGTCCTGATGGGCAAATCGATTGTCCAACC 47116805
Query 669 TGGGTATAGGG 679
||| |||||||
Sbjct 47116806 TGGATATAGGG 47116816
>seq1
Length=228908639
Score = 120 bits (132), Expect = 1e-24
Identities = 104/129 (81%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | |||| ||||| ||||| ||||||||| |||||| |||| |||||||||
Sbjct 121553848 GAGCACAAATGTTAGGACCTGAAAGGTGGTGAACTCTGCCTGGGCAGGGCAAAGCCAGAG 121553789
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || ||| || ||| |||||||||| || || || |||||
Sbjct 121553788 GAAACTCTGGTGGAGGTCCGTAGCAGTCCTGATGTGCAAATCGGTCATCCAACCTGGGTG 121553729
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 121553728 TAGGGGCGA 121553720
Score = 120 bits (132), Expect = 1e-24
Identities = 104/129 (81%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | |||| ||||| ||||| ||||||||| |||||| |||| |||||||||
Sbjct 125281809 GAGCACAAATGTTAGGACCTGAAAGGTGGTGAACTCTGCCTGGGCAGGGCAAAGCCAGAG 125281868
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || ||| || ||| |||||||||| || || || |||||
Sbjct 125281869 GAAACTCTGGTGGAGGTCCGTAGCAGTCCTGATGTGCAAATCGGTCATCCAACCTGGGTG 125281928
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 125281929 TAGGGGCGA 125281937
Score = 80.6 bits (88), Expect = 1e-12
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|||| ||||||||||||||||||||||||| || ||| || ||| |||||||||| |
Sbjct 121552887 AGGGCAAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCAGTCCTGATGTGCAAATCGGT 121552828
Query 660 CGTCAAATTTGGGTATAGGGGCGA 683
| || || ||||| ||||||||
Sbjct 121552827 CATCCAACCTGGGTGCAGGGGCGA 121552804
>seq638
Length=135235416
Score = 107 bits (118), Expect = 8e-21
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | | |||||||||||
Sbjct 85030996 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATTTAAAGCTAAAT 85031055
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||| ||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 85031056 ACCGGCACGAGACTGATAGTAAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 85031115
Query 160 AGAGAGTTAAAAAG 173
|||||||| || ||
Sbjct 85031116 AGAGAGTTCAAGAG 85031129
>seq219
Length=165317712
Score = 93.3 bits (102), Expect = 2e-16
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | | || |||||||||||| | || |||| |||||| | | |||| |||||||
Sbjct 106870404 GAGTTGGGCTGCTTGGGAATGCAGATGAAAGTGGGTGGTAAACTCCATCTATGGCTAAAT 106870463
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| |||| |||||| |||| ||||||| | | |||||| ||||||| |||| | ||
Sbjct 106870464 ACTGGCATGAGACCAATAGTCAACAAGTACCATAAGCGAAAGTTGAAAAGAACTTAGAAA 106870523
Query 160 AGAGAGTTAAAAAG 173
||||| || || ||
Sbjct 106870524 AGAGACTTCAAGAG 106870537
>seq23939
Length=2000
Score = 87.8 bits (96), Expect = 7e-15
Identities = 91/118 (77%), Gaps = 1/118 (1%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| || || |||| |||| ||||||||||| ||| |||| |||||||||||||
Sbjct 372 TGTTAGGCACCAAAAGCTGGTAAACTATGCCTGGGCAGGA-GAAGTGAGAGGAAACTCTG 314
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||| || | || ||| ||| ||||||||||| || || || |||| ||||||||
Sbjct 313 GTGGGGGTCTGTAGTGGTCCTGACGTGCAAATCGGTCATCTGATCTGGGCATAGGGGC 256
>seq187
Length=203093366
Score = 80.6 bits (88), Expect = 1e-12
Identities = 78/99 (79%), Gaps = 1/99 (1%)
Strand=Plus/Minus
Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635
|||||||||||||||||||||| || | |||||| |||||||| ||||||||| | |
Sbjct 118449708 AAAGATGGTGAACTATGCCTGAGCAGAGGAAAGCCACAGGAAACT-TGGTGGAGGTTTGT 118449650
Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|| ||| ||| ||||| |||| || || | ||||||
Sbjct 118449649 AGTGGTCCTGATGTGCAGATCGGTCATCTGACCTGGGTA 118449611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079126749050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |