Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq860 176 2e-42 seq219 113 2e-23 seq923 100 1e-19 seq931 91.5 7e-17 seq23939 89.7 2e-16 seq499 78.8 4e-13 >seq860 Length=57935654 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23666960 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 23666901 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| ||||||||||| |||||||||| Sbjct 23666900 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGAAATGTGGCGTA 23666859 >seq219 Length=165317712 Score = 113 bits (124), Expect = 2e-23 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||| ||| |||||||||||| || |||||||||||||||||||||| Sbjct 106870183 GGAAAAGAAATTAACCTGGACTCCCTCAGTAACAGCAAGTGAACAGGGAAGAGCCCAGCA 106870242 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | || ||| || ||| ||||||| || Sbjct 106870243 TTGAATCCCTGCCCCACAGTAGGGTGCAGGAAATGTGGCATA 106870284 >seq923 Length=34650175 Score = 100 bits (110), Expect = 1e-19 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 4349375 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 4349434 Query 61 CCGAATCCCCGCC 73 || ||| || ||| Sbjct 4349435 CCAAATGCCTGCC 4349447 >seq931 Length=156331669 Score = 91.5 bits (100), Expect = 7e-17 Identities = 84/104 (81%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACT-AACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| ||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct 48528711 GGAGAAGAAACTTAACAAGGATTCCCTCAGTAACAGCAAGTGAACATGGAAGAGCCCAGT 48528652 Query 60 GCCGAATCCCCGCCCCGCGGT-GGGGCGCGGGACATGTGGCGTA 102 || || | | ||||| | || |||| | ||| ||||||| || Sbjct 48528651 GCTAAACCTCTGCCCCACAGTGGGGGTGTTGGAAATGTGGCATA 48528608 >seq23939 Length=2000 Score = 89.7 bits (98), Expect = 2e-16 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | ||||||||||||| |||| ||||| || ||||||||| || ||||| ||| Sbjct 1677 AAATGGAACTAACCAGGATGCCCTTAGTAAAGGTAAGTGAACAG---TGATCCCAGTGCC 1621 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||| ||||| ||||||| |||||| | |||||||| Sbjct 1620 AAATCCCTGCCCCTTGGTGGGGTGCGGGAAAAGTGGCGTA 1581 >seq499 Length=148642438 Score = 78.8 bits (86), Expect = 4e-13 Identities = 80/103 (78%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTC-AGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| | |||||||| | ||| |||||||||| ||||||| || || Sbjct 88356286 GGAAAAGAAACTAACAAAAATTCCCTCTAATAATGGCGAGTGAATTGGGAAGAACCTAGT 88356345 Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||| |||| | ||| || | || | ||||| |||| Sbjct 88356346 GCTGAATCCTTGCCCAGTGGTCAGGAGTGGAAAATGTGACGTA 88356388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230312064240