Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq126 347 2e-93
seq860 188 1e-45
seq931 109 9e-22
seq235 91.5 3e-16
seq187 87.8 3e-15
seq219 78.8 2e-12
>seq126
Length=135448346
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 24198165 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 24198224
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 24198225 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 24198284
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 24198285 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 24198344
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 24198345 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 24198404
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 24198405 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 24198458
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 24199246 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 24199305
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 24199306 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 24199365
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 24199366 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 24199425
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 24199426 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 24199485
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 24199486 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 24199539
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 24200149 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 24200208
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 24200209 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 24200268
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 24200269 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 24200328
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 24200329 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 24200388
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 24200389 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 24200442
Score = 214 bits (236), Expect = 3e-53
Identities = 182/222 (82%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 3 CTAAGCGGAATTACCATTGGGGCGACGGTCATCA-GTAGGGTAAAACTAACCTGTCTCAT 61
|| ||| | |||||||| | | || ||||| | ||||||||||||||||||||||
Sbjct 24191560 CTGAGCAGGATTACCATGGCAACAACACACATCACGGAGGGTAAAACTAACCTGTCTCAC 24191619
Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121
| |||||||| ||||||||| | ||||||||||||||||||||||||| |||| |||
Sbjct 24191620 TAGGGTCTAAATCCAGCTCACATGCCCTATTAGTGGGTGAACAATCCAATGCTTGGTGAA 24191679
Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181
|||| |||| ||||||||||| || ||||| |||||||||||||||| || |||||
Sbjct 24191680 TTCTACTTCACAGTGATAGGAAGAACCAACATCACAGGATCAAAAAGCAACATCCCTATG 24191739
Query 182 AACGCTTGGCTGCCACAAGCCAGTTAT-CCCTGTGGTAACTT 222
|| ||||||| || || |||||||||| ||| ||||||||||
Sbjct 24191740 AATGCTTGGCCGCAACGAGCCAGTTATCCCCCGTGGTAACTT 24191781
>seq860
Length=57935654
Score = 188 bits (208), Expect = 1e-45
Identities = 144/170 (85%), Gaps = 3/170 (2%)
Strand=Plus/Plus
Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102
||||||||||||||||||||||| |||||||| |||||| ||||||| ||| ||||||||
Sbjct 23662662 TAAAACTAACCTGTCTCATGACGTTCTAAACCAAGCTCAGGTTCCCTGTTATTGGGTGAA 23662721
Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162
| ||||||||||| |||||||| ||| | ||||||||| || ||| | |||||||
Sbjct 23662722 CCATCCAACGCTTGGTGAATTCTGTTTC---ACAATAGGAAGATCCAACACCAAAGGATC 23662778
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||| | |||||||||||| |||||| | ||||| |||||||||||
Sbjct 23662779 AAAAAGCGATGTCGCTATGAACTCTTGGCCACTACAAGGCAGTTATCCCT 23662828
Score = 86.0 bits (94), Expect = 1e-14
Identities = 79/95 (83%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 73 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG-CTTCG 131
||||||||| ||| || ||||||||||||||||||| ||| |||||||| ||||
Sbjct 42643803 CCCAGCTCAGGTTTTCTG--AGTGGGTGAACAATCCAAC-CTTGGTGAATTCTGTCTTCC 42643747
Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166
||||||||||||||| ||||| |||||||||||
Sbjct 42643746 A-ATGATAGGAAGAGCCCACATCCAAGGATCAAAA 42643713
>seq931
Length=156331669
Score = 109 bits (120), Expect = 9e-22
Identities = 74/83 (89%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct 71275557 AATTCTGCTTCACAATGATAGGAAGAGCCGACACTGAAGGATCAAAAAGCCACGTTGCTA 71275616
Query 180 TGAACGCTTGGCTGCCACAAGCC 202
||||| ||||||||||| |||||
Sbjct 71275617 TGAACTCTTGGCTGCCATAAGCC 71275639
>seq235
Length=173266796
Score = 91.5 bits (100), Expect = 3e-16
Identities = 61/68 (90%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
||||||||||| ||||||||| |||||||||||| || |||||||| ||||||| ||||
Sbjct 15482295 TAGGAAGAGCCAACATCGAAGCATCAAAAAGCAAGGTTGCTATGAATGCTTGGCAGCCAT 15482354
Query 198 AAGCCAGT 205
||||||||
Sbjct 15482355 AAGCCAGT 15482362
>seq187
Length=203093366
Score = 87.8 bits (96), Expect = 3e-15
Identities = 150/220 (68%), Gaps = 17/220 (8%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||| ||||| ||| | | |||| | ||||||| ||| ||
Sbjct 145847810 TCATCAGTAGGACAAAACTGTCCTGTATCACCATTGCCTAATCATAGCTCACATTCT-TA 145847752
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137
||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct 145847751 TTAATGGGTGAACAATCCCACCCTTAGTGAAGTCTGCTTCACAATGAAGAACCAATATTT 145847692
Query 138 ---TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194
| |||| || | ||| ||||| |||| || | | || ||||| ||| || |
Sbjct 145847691 TACAACGAAGTGCTAATATCTAAGGACCAAACAGTGGCATTGCCATGAATACTTAGCCAC 145847632
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||| || | ||| ||||| ||| ||||||| ||||||
Sbjct 145847631 CACATTGCAATGATCTCTGTGATAAATTTTCTGACACCTC 145847592
>seq219
Length=165317712
Score = 78.8 bits (86), Expect = 2e-12
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||| || ||||| || |||||||||||||||||||||||| ||||||||
Sbjct 19640692 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAAGCCAGTTATCTCTGTGGTA 19640747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854052165216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |