Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq773 91.5 2e-16 seq126 86.0 7e-15 seq287 82.4 9e-14 >seq773 Length=81384781 Score = 91.5 bits (100), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| | |||| | |||| Sbjct 33510046 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGAGGTATCCAGGCG 33509988 Query 70 --TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || ||||||||||||||||||||||| |||| ||||| Sbjct 33509987 GCTCAGACCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33509947 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | | || Sbjct 33507381 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGACG 33507323 Query 70 --TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || ||||||||||||||||||||||| |||| ||||| Sbjct 33507322 GCTCAGACCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33507282 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 33525398 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 33525340 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 33525339 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33525299 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 33527224 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 33527166 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 33527165 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33527125 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 33528809 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 33528751 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 33528750 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33528710 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 33530390 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 33530332 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 33530331 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33530291 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 33531798 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 33531740 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 33531739 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 33531699 >seq126 Length=135448346 Score = 86.0 bits (94), Expect = 7e-15 Identities = 84/102 (82%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 ||||||||||||||| || |||| |||||||| |||||||| ||| |||| | ||| Sbjct 24078039 AAACCAACAAAATAGA-AC-CACGGTCCTATTCCATTATTCCTAGCTGCAGTATCCAGGC 24078096 Query 69 G--TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | | || ||||||||||||||||||||||| |||| ||||| Sbjct 24078097 GGCTCAGACCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 24078138 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| ||||||||| ||| |||| | || | Sbjct 24075176 AAACCAACAAAATAGA-ACTGTGGTCCTATTCCATTATTCCAAGCTGCAGTATCCAGGTG 24075234 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||||||||| |||| ||||| Sbjct 24075235 GCTTGGACCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 24075275 >seq287 Length=159110946 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 85252881 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 85252939 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 85252940 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 85252980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594965260374