Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq931 237 1e-57
seq638 107 2e-18
seq377 98.7 8e-16
seq39 82.4 6e-11
>seq931
Length=156331669
Score = 237 bits (262), Expect = 1e-57
Identities = 596/893 (67%), Gaps = 21/893 (2%)
Strand=Plus/Minus
Query 61045 AATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAA 61104
|| ||| | || || || | |||||||||||||| | ||||| |||| ||||| ||
Sbjct 44830903 AACCCTTGCCGCTTTGTCATCTTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAG 44830844
Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164
|||||||| |||||||||||||| |||||||| || ||||||| ||||| ||
Sbjct 44830843 AAGGCGGAGGCTTCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGGACATTCGGCAC 44830784
Query 61165 TGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224
||||| | | | || || | |||| || ||||| ||| ||||||||
Sbjct 44830783 TGGGAACCCCTGAAGCCCGAGGAGAGATATTTTATATCCCATGTTCTGGTTTTCTTTGCA 44830724
Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGT 61283
|| || || || || ||||| ||||| |||| || ||| || || || || |
Sbjct 44830723 GCAAGTGATGGCATAGTAAATGAAAATTTGGTGGAGCGATTTAGC-CAAATAGTTCAGAT 44830665
Query 61284 GTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343
| || || || |||||||| |||||||| ||||||||||| || | || || || ||
Sbjct 44830664 TACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAAT 44830605
Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403
||| ||| | || || || || ||||||| || | ||| | ||| | |||||
Sbjct 44830604 GTATAGTCTCCTTATTGACACTTACATCAAAGATCTCAAAGAAAGGGAATTTCTCTTCAA 44830545
Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463
|||||| || ||||| || || ||| ||| || ||||||||||| |||||
Sbjct 44830544 TGCCATTGA-ACGATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGAT--T 44830488
Query 61464 CAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521
| |||| |||||| | |||||||| | | || || || | || || || |
Sbjct 44830487 GGGGACAAAGAGGCTACCTATGGTGAACATGTTGTAGCCTTCGCTGCAGTAGAAGGCATC 44830428
Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581
|| || ||| || ||||| | || || ||| | |||||||| |||| ||||| ||
Sbjct 44830427 TTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAACGAGGACCGATGCCTGGC 44830368
Query 61582 CTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGT 61640
|| || || ||||| | || || || | || ||||| | || ||||||||||||
Sbjct 44830367 CTCACGTTTTCCAATGAACTTATTAGCA-GAGATGAGGGTTTACACTGTGATTTTGCTTG 44830309
Query 61641 TTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGT 61700
||| | ||||||| | ||||| | || ||||||||| ||| | || || |
Sbjct 44830308 CTTGATGTTCAAAC---ACCTGGTACACAAACCATCGGAGGAGAAAGTGAGAGAAATAAT 44830252
Query 61701 TCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCAT 61760
| | || || || ||||| ||||| || || || || ||||| || |||||
Sbjct 44830251 TATCAATGCTGTTCAGATAGAACAAGAATTCCTCACCGAGGCCTTGCCTGTGAAGCTCAT 44830192
Query 61761 CGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGT 61820
|| |||||||| |||||| ||| || ||||| ||||| || ||| | || || |
Sbjct 44830191 TGGGATGAATTGCACTCTAATGAAGCAATACATTGAGTTTGTGGCAGACAGACTTATGCT 44830132
Query 61821 CGATTTGGGTATGAAGC--GGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878
|| ||||| | ||| || | | | | | | ||||||||| || | ||| |
Sbjct 44830131 GGAACTGGGT-TTTAGCAAGGTTTTCGGAGTAG-AGAGCCCATTTGACTTTACGGAGAAT 44830074
Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
||||| || | ||||| || || || |||| | |||||||| |||||
Sbjct 44830073 ATTTCACT-----GAAAGACTAACTTCTTTGAGAGGAGAGTAGGCGAGTATCA 44830026
>seq638
Length=135235416
Score = 107 bits (118), Expect = 2e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| || ||||| |||||||| || ||||| ||||| |||| ||||| ||
Sbjct 3886888 GGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTG 3886829
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | ||| ||||| ||||| || || ||
Sbjct 3886828 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTG 3886769
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 3886768 AGACTCAATGATGGCATACCAAAG 3886745
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 65690 CCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAA 65749
|||| |||||||||||| | |||||||| || || || || ||||||| || || ||
Sbjct 3890737 CCCTGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGAGCACCATAATAAATAGTTTCAAAG 3890678
Query 65750 ATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAA 65809
|| | ||| ||| | || || | ||||| | || | |||||||| ||||
Sbjct 3890677 ATCTGCTTATTCAGTAACTGGGCTTCTGCACTCTCAAAAGGGTATCTCATCAGGATAAAA 3890618
Query 65810 GTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853
| || ||||||||||| || ||||| || ||||| ||||| ||
Sbjct 3890617 GCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCG 3890574
>seq377
Length=146757320
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 103158256 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATTGAGAAT 103158315
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 103158316 GTTCACTCAGAGATGTACAGTTTGCTGATAGACACTTACATCAGAGA 103158362
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 103169159 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATTGAGAAT 103169100
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 103169099 GTTCACTCAGAGATGTACAGTTTGCTGATAGACACTTACATCAGAGA 103169053
>seq39
Length=107640188
Score = 82.4 bits (90), Expect = 6e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
|||| || || || ||| || || || || || || | |||||||||||||| | |
Sbjct 97372393 ATGAGCCGCTGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTCCCCATCGAGTACCATG 97372334
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|||| |||| ||||| || ||||| || |||||||||||||| | ||||||||
Sbjct 97372333 ATATCTGGCAGATGTATAAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAGGAGGT 97372279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397370740549040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |