Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq53 179 2e-43 seq170 176 2e-42 seq57 176 2e-42 seq46 176 2e-42 seq18 113 2e-23 seq54 100 1e-19 seq64 91.5 7e-17 seq51 80.6 1e-13 >seq53 Length=46709983 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8213944 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 8214003 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 8214004 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 8214045 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8396982 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 8397041 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 8397042 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 8397083 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8258165 GGAAAAGACACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 8258224 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 8258225 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 8258266 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8441202 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 8441261 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 8441262 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 8441303 >seq170 Length=161802 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 113404 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 113463 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 113464 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 113505 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 157376 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 157435 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 157436 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 157477 >seq57 Length=179772 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130260 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 130319 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 130320 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 130361 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175339 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 175398 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 175399 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 175440 >seq46 Length=83257441 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 35151200 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAGAGCCCAGCG 35151141 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 35151140 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 35151099 >seq18 Length=181538259 Score = 113 bits (124), Expect = 2e-23 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||| ||| |||||||||||| || |||||||||||||||||||||| Sbjct 123654956 GGAAAAGAAATTAACCTGGACTCCCTCAGTAACAGCAAGTGAACAGGGAAGAGCCCAGCA 123655015 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | || ||| || ||| ||||||| || Sbjct 123655016 TTGAATCCCTGCCCCACAGTAGGGTGCAGGAAATGTGGCATA 123655057 >seq54 Length=50818468 Score = 100 bits (110), Expect = 1e-19 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 20911157 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 20911216 Query 61 CCGAATCCCCGCC 73 || ||| || ||| Sbjct 20911217 CCAAATGCCTGCC 20911229 >seq64 Length=156040895 Score = 91.5 bits (100), Expect = 7e-17 Identities = 84/104 (81%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACT-AACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| ||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct 47890374 GGAGAAGAAACTTAACAAGGATTCCCTCAGTAACAGCAAGTGAACATGGAAGAGCCCAGT 47890315 Query 60 GCCGAATCCCCGCCCCGCGGT-GGGGCGCGGGACATGTGGCGTA 102 || || | | ||||| | || |||| | ||| ||||||| || Sbjct 47890314 GCTAAACCTCTGCCCCACAGTGGGGGTGTTGGAAATGTGGCATA 47890271 >seq51 Length=58617616 Score = 80.6 bits (88), Expect = 1e-13 Identities = 78/100 (78%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | ||||||||||||| |||| ||||| | |||||||| || ||||| ||| Sbjct 24003350 AAATGGAACTAACCAGGATGCCCTTAGTAAAGTTAGGTGAACAG---TGATCCCAGTGCC 24003294 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||| ||||| ||| ||| |||||| |||||||||| Sbjct 24003293 AAATCCCTGCCCCTTGGTAGGGTGCGGGAAATGTGGCGTA 24003254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230398751520