Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12] 7,601 sequences; 2,946,843,737 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq463 179 2e-43 seq3767 172 3e-41 seq274 105 3e-21 seq186 104 1e-20 seq434 96.9 2e-18 >seq463 Length=78541002 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31042764 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 31042823 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 31042824 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 31042865 >seq3767 Length=2501 Score = 172 bits (190), Expect = 3e-41 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2383 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 2324 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 ||||||||||||||||||||||||| ||||| |||||||| Sbjct 2323 CCGAATCCCCGCCCCGCGGTGGGGCACGGGAAATGTGGCG 2284 >seq274 Length=96509753 Score = 105 bits (116), Expect = 3e-21 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 30482841 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 30482900 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 30482901 CCAAATCCCTGCC 30482913 >seq186 Length=181584905 Score = 104 bits (114), Expect = 1e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 122584999 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 122585058 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||||| | |||| ||| ||| || Sbjct 122585059 TTGAATCCCTGCCCCACAGTGGGGTGTGGGAAATGGGGCATA 122585100 >seq434 Length=59248254 Score = 96.9 bits (106), Expect = 2e-18 Identities = 83/102 (81%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||||||||||||||| ||||| || ||||||||| | |||||||| Sbjct 24241094 GGAAAATAAACTAACCAGGATTCCCTTAGTAAAGGGGAGTGAACA---AGGAGCCCAGTA 24241038 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||| | ||| ||||||| |||||| ||| || ||| Sbjct 24241037 CCAAATCCCTGTCCCTTGGTGGGGTGCGGGAAATGAGGTGTA 24240996 Score = 86.0 bits (94), Expect = 3e-15 Identities = 78/98 (80%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | ||||||||||||| |||| ||||| || |||||||||| | ||||| ||| Sbjct 24079808 AAATGGAACTAACCAGGATGCCCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 24079752 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 |||||| ||||| ||||||| | |||| |||||||| Sbjct 24079751 AAATCCCTGCCCCTTGGTGGGGTGAGGGAAATGTGGCG 24079714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230383581840