Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12]
7,601 sequences; 2,946,843,737 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq228 347 2e-93
seq434 187 4e-45
seq93 89.7 9e-16
seq30 82.4 1e-13
seq186 80.6 5e-13
seq375 78.8 2e-12
seq163 78.8 2e-12
>seq228
Length=146850525
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 45349469 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 45349410
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 45349409 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 45349350
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 45349349 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 45349290
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 45349289 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 45349230
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 45349229 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 45349176
>seq434
Length=59248254
Score = 187 bits (206), Expect = 4e-45
Identities = 155/189 (82%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
|||||||||||||||||||||| | ||||||| |||||| ||||| | ||| |||||||
Sbjct 24076178 GTAAAACTAACCTGTCTCATGATGTTCTAAACTAAGCTCAGGTTCCTTGTTACTGGGTGA 24076237
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| |||||| |||| |||||||||||| | ||||||||| || || | ||||||
Sbjct 24076238 ACCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGATCCAGCACCAAAGGAT 24076294
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
|||||||||| || ||||||||| |||||| | ||||| |||||||||||||||| ||
Sbjct 24076295 CAAAAAGCAATGTTGCTATGAACTCTTGGCCACTACAAGGCAGTTATCCCTGTGGTGTCT 24076354
Query 222 TTTCTGGCA 230
| |||| ||
Sbjct 24076355 TCTCTGACA 24076363
Score = 170 bits (188), Expect = 3e-40
Identities = 128/150 (85%), Gaps = 3/150 (2%)
Strand=Plus/Minus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||| |||||||||||| | ||||||||||||||| ||||||||||| ||| |||
Sbjct 23578546 GTAAAACTATCCTGTCTCATGATGTTCTAAACCCAGCTCAGGTTCCCTATTATTGGATGA 23578487
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| |||||| |||| |||||||||||| | |||||||||||| |||| || ||||
Sbjct 23578486 ACCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGAGCCAACATTGAGGGAT 23578430
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGC 191
||||||| |||||||||||||| ||||||
Sbjct 23578429 CAAAAAGGGACGTCGCTATGAACTCTTGGC 23578400
>seq93
Length=170955103
Score = 89.7 bits (98), Expect = 9e-16
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
||||||||||| ||| |||| |||||||||||| || |||||||||||||||| |||||
Sbjct 155757635 TAGGAAGAGCCACCATTGAAGCATCAAAAAGCAAGGTTGCTATGAACGCTTGGCCGCCAC 155757576
Query 198 AAGCCAG 204
|||||||
Sbjct 155757575 AAGCCAG 155757569
>seq30
Length=192460366
Score = 82.4 bits (90), Expect = 1e-13
Identities = 68/82 (83%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 73913640 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 73913699
Query 60 ATGACGGTCTAAACCCAGCTCA 81
| || ||||||||||||| |||
Sbjct 73913700 AGGATGGTCTAAACCCAGATCA 73913721
>seq186
Length=181584905
Score = 80.6 bits (88), Expect = 5e-13
Identities = 98/134 (73%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220
||| |||| | || |||||||| ||||| | ||||||||||||||| ||||| || ||
Sbjct 154767009 TCACAAAGTGATGTTGCTATGAATGCTTGACCACCACAAGCCAGTTATTCCTGTAGTCAC 154766950
Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
||||||| || ||| || | ||| | || | ||||||| || || |||||
Sbjct 154766949 TTTTCTGACATCTCCTGCTTGAAACCCAAAAGGTCAGAAGGATCATGAGTCCCTGCTTTC 154766890
Query 281 ATGGTTTGTATTCA 294
| ||| ||||||||
Sbjct 154766889 AAGGTCTGTATTCA 154766876
>seq375
Length=80997621
Score = 78.8 bits (86), Expect = 2e-12
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||| || ||||| || |||||||||||||||||||||||| ||||||||
Sbjct 60920940 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAAGCCAGTTATCTCTGTGGTA 60920885
>seq163
Length=189454096
Score = 78.8 bits (86), Expect = 2e-12
Identities = 154/228 (68%), Gaps = 21/228 (9%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||| ||||| | | | | |||| | ||||||||||| | ||
Sbjct 132895086 TCATCAGTAGGACAAAACTGCCCTGTATTACCATTGCCTAATCACAGCTCACGTT-CTTA 132895028
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137
||| |||||||||||| | || |||| ||| ||||||| ||||
Sbjct 132895027 TTAATGGGTGAACAATGCCACCCTTAGTGAAGGCTGCTTCATAATGAAGAACCAATATTT 132894968
Query 138 ---TAGGAAGAGCCGACATCGAAGGATCAAA-AAGCA---ACGTCGCTATGAACGCTTGG 190
| |||| || | ||| ||||| |||| || || | | || ||||| |||||
Sbjct 132894967 TACAATGAAGTGCTAATATCTAAGGACCAAACAAACAGTGGCATTGCCATGAATACTTGG 132894908
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
| ||||| |||| ||| ||||| || |||||| ||||||| ||
Sbjct 132894907 CCACCACATTGCAGTGATCTCTGTGACAAACTTTCTGACACCTCTTGC 132894860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854335057056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |