Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12]
7,601 sequences; 2,946,843,737 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq509 197 3e-48
seq463 197 3e-48
seq202 77.0 6e-12
>seq509
Length=319999
Score = 197 bits (218), Expect = 3e-48
Identities = 201/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 464 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 407
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 406 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 347
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 346 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 287
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 286 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 227
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 226 AAGTCCCTGCCCTTTGTA 209
>seq463
Length=78541002
Score = 197 bits (218), Expect = 3e-48
Identities = 201/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 31039818 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 31039875
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 31039876 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 31039935
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 31039936 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 31039995
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 31039996 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 31040055
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 31040056 AAGTCCCTGCCCTTTGTA 31040073
>seq202
Length=171882078
Score = 77.0 bits (84), Expect = 6e-12
Identities = 80/101 (79%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | || || ||||||||||||||||
Sbjct 154829012 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTCAG-CAATAACAGGTCTGTG 154828955
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||| | |||| ||| | |||||||||||
Sbjct 154828954 ATGCCCTTAGATGTCCAGGGCTACACATGTGCTACACTGAC 154828914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947128003328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |