Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq261797 179 2e-43 seq10 105 3e-21 seq6 104 1e-20 seq20 100 1e-19 seq182031 84.2 1e-14 >seq261797 Length=48357 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17475 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 17416 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 17415 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 17374 >seq10 Length=92844088 Score = 105 bits (116), Expect = 3e-21 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 62734417 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 62734358 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 62734357 CCAAATCCCTGCC 62734345 >seq6 Length=180051392 Score = 104 bits (114), Expect = 1e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 121076262 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 121076321 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||||| | |||| ||| ||| || Sbjct 121076322 TTGAATCCCTGCCCCACAGTGGGGTGTGGGAAATGGGGCATA 121076363 >seq20 Length=74971481 Score = 100 bits (110), Expect = 1e-19 Identities = 85/100 (85%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAA-CCAGG-ATTCCCTCAGTAACGGCGAGTGAAC-AGGGAAGAGCCCA 57 |||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||| |||| Sbjct 30211304 GGAAAAGAAACTAAACCAGGCATTCCTCCAGTAATGGCGAGTGAACCAGGGAAGAACCCA 30211363 Query 58 GC--GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 95 | |||||| ||||| |||||||||||| ||||| ||| Sbjct 30211364 GTTGGCCGAAATCCCGCACCGCGGTGGGGCACGGGAAATG 30211403 >seq182031 Length=4412 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 1279 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAAAGCCCAGCA 1338 Query 61 CCGAATCCC 69 | ||||||| Sbjct 1339 CTGAATCCC 1347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229784987520