Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq9002 141 1e-31 >seq9002 Length=6500712 Score = 141 bits (156), Expect = 1e-31 Identities = 179/238 (75%), Gaps = 16/238 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| ||||| ||||| | | |||||| |||||| | Sbjct 4144663 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCACACTTACTGGGAATT-C 4144610 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | || ||||||||| | ||||||||||||| ||||| || || Sbjct 4144609 CTCGTTCGTGGGGAATAATTGCAATCCCCAATCCCCATCACGAATGGGGTTCAACAGGTT 4144550 Query 120 ACCCGGACCTGTCGGCCAAGGT--GATAG--ACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||| ||||| ||| ||| | ||| || || ||| | ||||||||||||| Sbjct 4144549 ACCCGCACCTG----CCAGGGTAGGGTAGGCACACGCTGAGCCAGTTAGTGTAGCGCGCG 4144494 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| |||| |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 4144493 TGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 4144437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751929095095