Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq9002 163 5e-38 >seq9002 Length=6500712 Score = 163 bits (180), Expect = 5e-38 Identities = 210/284 (74%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||| ||| Sbjct 4143740 ATGCTCTTAGCTGAGTGTCCCGTGGGGCCCGAAGCGTTTACTTTGAAAAAATTAG--TGT 4143797 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || |||||| ||| |||||||| ||||||||| | || Sbjct 4143798 TCAAAGCAGGCCCGAGCCGCCTGAATACTGCAGCTAGGAATAATGGAATAGGACC-GTGG 4143856 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 4143857 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTT 4143916 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| | ||||| || | ||||||| Sbjct 4143917 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACTGGCGCAAGACGGACCAGAGCGAAAGTA 4143976 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||| |||||||||||||||| |||||||||| || || Sbjct 4143977 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAGAGG 4144019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915110923584