Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq9002 167 1e-39 seq7780 105 3e-21 seq1780 104 1e-20 seq1080 96.9 2e-18 >seq9002 Length=6500712 Score = 167 bits (184), Expect = 1e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 4147138 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAGAGCCCAGTG 4147197 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 ||||||||||||||||||||||||||||||| |||||||| Sbjct 4147198 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCG 4147237 >seq7780 Length=5309094 Score = 105 bits (116), Expect = 3e-21 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 1260005 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 1260064 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 1260065 CCAAATCCCTGCC 1260077 >seq1780 Length=18395747 Score = 104 bits (114), Expect = 1e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 14553856 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 14553915 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||||| | |||| ||| ||| || Sbjct 14553916 TTGAATCCCTGCCCCACAGTGGGGTGTGGGAAATGGGGCATA 14553957 >seq1080 Length=1940247 Score = 96.9 bits (106), Expect = 2e-18 Identities = 83/102 (81%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||||||||||||||| ||||| || ||||||||| | |||||||| | Sbjct 1108837 GGAAAATAAACTAACCAGGATTCCCTTAGTAAAGGGGAGTGAACA---AGGAGCCCAGTG 1108781 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||| | || ||||||| |||||| ||| || ||| Sbjct 1108780 CCAAATCCCTGTACCTTGGTGGGGTGCGGGAAATGAGGTGTA 1108739 Score = 80.6 bits (88), Expect = 1e-13 Identities = 77/98 (79%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | ||||||||||||| |||| || || || |||||||||| | ||||| ||| Sbjct 955051 AAATGGAACTAACCAGGATGCCCTTAGCAAAGGTAAGTGAACAGG---CATCCCAGTGCC 954995 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 |||||| ||||| ||||||| | |||| |||||||| Sbjct 954994 AAATCCCTGCCCCTTGGTGGGGTGAGGGAAATGTGGCG 954957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230378976720