Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq9002 161 2e-37 seq2780 77.0 6e-12 >seq9002 Length=6500712 Score = 161 bits (178), Expect = 2e-37 Identities = 193/258 (75%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 4144411 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 4144468 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||| |||||||||||||||| || | || || || | | Sbjct 4144469 ATGCCCTTAGATGTCTGGGGCTGCACGCGCGCTACACTAACTGGCTCAGCGTGTGCCTAC 4144528 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | || |||| |||||| || | || | | ||||| ||||||| | | |||| Sbjct 4144529 CCTACCCTGGCAGGTGCGGGTAACCTGTTGAACCCCATTCGTGATGGGGATTGGGGATTG 4144588 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | |||||||||| || |||||| | | ||||| ||| ||| || Sbjct 4144589 CAATTATTCCCCACGAACGAGGAATTCCCAGTAAGTGTGGGTCATAAGCTTGCG----TT 4144644 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 4144645 AAGTCCCTGCCCTTTGTA 4144662 >seq2780 Length=23506373 Score = 77.0 bits (84), Expect = 6e-12 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | || || |||||||||||||||| Sbjct 14164527 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTCAG-CAATAACAGGTCTGTG 14164584 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| ||| | ||||||||||| Sbjct 14164585 ATGCCCTTAGATGTCCAGGGCTACACATGTGCTACACTGAC 14164625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947107809024