Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9002 367 4e-99 seq8446 118 3e-24 >seq9002 Length=6500712 Score = 367 bits (406), Expect = 4e-99 Identities = 416/555 (75%), Gaps = 57/555 (10%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||| ||| Sbjct 4143546 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTAACTC 4143487 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4143486 CCCGGGACGGGAGTGGGTAATTTGCACGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 4143427 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 |||||||||||||||||||||| |||||| ||||||||| |||||| | |||||||||| Sbjct 4143426 CTCAGGCTCCCTCTCCGGAATCAAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 4143367 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || |||| |||||||| | | Sbjct 4143366 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCAAATGGGTCATCGCCGCCAC 4143307 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGAGCC------------ 285 || | |||||| | | ||||| | ||||| |||| ||| Sbjct 4143306 GGGGGGCTTGCGATCGGCCCGAGGTTATCTAAAGTCACCAAAGGCGCCGGCGCCCGCCCC 4143247 Query 286 ----------CCGAAGGGC-------GTTGGTTTTTTATCTAATAAATACAC-------C 321 ||||||||| ||||| |||| |||| |||||| ||| | Sbjct 4143246 CCAGCTGGGGCCGAAGGGCTGATCGGGTTGG-TTTTGATCTGATAAATGCACACATCCAC 4143188 Query 322 CCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || ||||| ||||| | ||||||||||||||||||||||||||| |||| Sbjct 4143187 CCCCGCGAAG--GGGGTCAGCGCCCGTCAGCATGTATTAGCTCTAGAATTACCACAGTTA 4143130 Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| |||| | || | | | |||| ||| |||||||||||||| |||||||||| Sbjct 4143129 TCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATAAGCCATTCGC 4143070 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||||||| | | ||||||||||||||| |||||||||||||||||| || Sbjct 4143069 AGTTTCACTGTACCGGCCATTCGTACTTAGACATGCATAGCTTAATCTTTGAGACAATCA 4143010 Query 490 TATGACTACTGGCAG 504 |||| |||||||||| Sbjct 4143009 TATG-CTACTGGCAG 4142996 >seq8446 Length=17995230 Score = 118 bits (130), Expect = 3e-24 Identities = 71/75 (95%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1874396 TAATTTGCACGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 1874455 Query 139 GAATCGAACCCTAAT 153 |||| ||||||| || Sbjct 1874456 GAATGGAACCCTGAT 1874470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510252992768