Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2836 131 7e-28 seq7735 118 4e-24 seq3150 111 7e-22 seq1869 104 1e-19 seq12367 96.9 1e-17 seq3611 91.5 6e-16 seq5758 82.4 3e-13 seq5225 80.6 1e-12 seq3569 77.0 1e-11 >seq2836 Length=447263 Score = 131 bits (144), Expect = 7e-28 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | ||||| | |||| ||||||||||||||||| |||||||||| ||||| || Sbjct 191888 GAGCACGAGCACACGTGTTAGGACCCGAAAGATGGTGGACTATGCCTGGGTAGGGCAAAC 191947 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| || |||||| ||| |||||||||| || || | Sbjct 191948 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCAGTCCTCCGACC 192007 Query 669 TGGGTATAGGGGCGA 683 |||||||||||| || Sbjct 192008 TGGGTATAGGGGTGA 192022 >seq7735 Length=1718127 Score = 118 bits (130), Expect = 4e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||| |||||||||||||||||||||| |||| |||||||||||| || ||| Sbjct 185675 TGTTAGGACCCCAAAGATGGTGAACTATGCCTGAGGAGGGCGAAGCCAGAGGACACGCTG 185616 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| | || || ||| | |||||||| |||||| | |||||||||||| || Sbjct 185615 GTGGAGGTCCATTGCAGTCCTGTCCTGCAAATCCATCGTCCGACCTGGGTATAGGGGTGA 185556 >seq3150 Length=577464 Score = 111 bits (122), Expect = 7e-22 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | ||||| | |||| ||||| ||||| |||||||||||||||| |||| ||| Sbjct 128099 GAGCATGAGCACAAATGTTAGGACCTGAAAGGTGGTGAACTATGCCTGGGCAGGGCAAAG 128040 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| | ||| || ||| ||||||||| || || || Sbjct 128039 CCAGAGGAAACTCTGGTGGAGGTCCATAGCAGTCCTGATGTGCAAATCAGTCATCCAACC 127980 Query 669 TGGGTATAGGG 679 ||||| ||||| Sbjct 127979 TGGGTGTAGGG 127969 >seq1869 Length=319635 Score = 104 bits (114), Expect = 1e-19 Identities = 103/132 (78%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 549 GAGTAAGAGCATA-GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607 ||| ||||| ||| | |||| || || | ||||| ||||||||||||| || ||| Sbjct 212105 GAGCAAGAGAATATGTTGTTAGGCACCAAGAGATGATGAACTATGCCTGGGCAGCAGGAA 212046 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 |||||||||||| |||||||||| | |||||| ||| |||| |||||| ||||| || Sbjct 212045 GCCAGAGGAAACGCTGGTGGAGGTCTGTAGCGGTCCTGACGTGTAAATCGGTCGTCTGAT 211986 Query 668 TTGGGTATAGGG 679 ||||||| ||| Sbjct 211985 CTGGGTATGGGG 211974 >seq12367 Length=565369 Score = 96.9 bits (106), Expect = 1e-17 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| || || ||||||| | ||||||||||| |||| |||||||||||||||||| Sbjct 162944 TGTTAGGCACCAAAAGATGATAAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTT 163003 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||| || | || ||| ||| | ||||| ||| ||||| || |||||||| |||| Sbjct 163004 GTGGGGGTCTGTAGTGGTCCTGACCTGCAAGTCGGTCGTCTGATCTGGGTATAAGGGC 163061 >seq3611 Length=193731 Score = 91.5 bits (100), Expect = 6e-16 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| || || |||||| ||||||||||||| |||| |||||||||| |||||| | Sbjct 17434 TGTTAGGCACCAAAAGATAATGAACTATGCCTGGGCAGGGCGAAGCCAGAGAAAACTCCG 17375 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||| | | ||| || ||| ||||||||| |||||| || || |||||||||| Sbjct 17374 GTGGGCGTCTGTAGCAGTCCTGAGGTGCAAATCAATCGTCTGATCTGTGTATAGGGGC 17317 >seq5758 Length=2984577 Score = 82.4 bits (90), Expect = 3e-13 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||||| ||| | || || | || || |||||||||||||||||||||| || | ||| Sbjct 530074 GAGTATGAGTACAG-TGCTAGGGCCTAAAAGATGGTGAACTATGCCTGAGCAGAGGAAAG 530016 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCA 652 ||| ||||||||| |||||||| | | || ||||||| ||||| Sbjct 530015 CCACAGGAAACTC-GGTGGAGGTTTGTAGTGGTTCTGATGTGCA 529973 >seq5225 Length=4237731 Score = 80.6 bits (88), Expect = 1e-12 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||| |||||||||||| | || || | |||||| | | |||| ||||||| Sbjct 1974303 GAGTTGGGTTGCTTGGGAATGCAGACCAAAGTGAGTGGTAAACTCCATCTATGGCTAAAT 1974244 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| |||||| |||| ||| ||| | | ||||| | ||||| |||||| | Sbjct 1974243 ACTGGCGTGAGACCAATAGTCAACACGTACCATAAGGGAAAGTTAAAAAGAACTTTGAAG 1974184 Query 160 AGAGAGTTAAAAAG 173 ||||| || || || Sbjct 1974183 AGAGACTTCAAGAG 1974170 >seq3569 Length=4754192 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/104 (77%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635 ||||||||| ||||||||||| | | |||||||||||||| |||||||||| | | Sbjct 2306308 AAAGATGGTAAACTATGCCTGGGCAAGACGAAGCCAGAGGAAA--CTGGTGGAGGTCCAC 2306251 Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 | ||| ||| | |||||| ||| ||| || ||| ||||||| Sbjct 2306250 AATGGTCCTGATGGGCAAATTGATTGTCCAACCTGGATATAGGG 2306207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079724989550