Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq5136 109 3e-22 seq5225 104 1e-20 seq3611 87.8 8e-16 seq12367 77.0 1e-12 >seq5136 Length=1549844 Score = 109 bits (120), Expect = 3e-22 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 242569 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCAAGTGAACAGGTAAGAGCCCAGCA 242510 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 242509 CCAAATCCCTGCC 242497 >seq5225 Length=4237731 Score = 104 bits (114), Expect = 1e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 1974524 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 1974465 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||||| | |||| ||| ||| || Sbjct 1974464 TTGAATCCCTGCCCCACAGTGGGGTGTGGGAAATGGGGCATA 1974423 >seq3611 Length=193731 Score = 87.8 bits (96), Expect = 8e-16 Identities = 81/102 (79%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||| ||||||||||| ||||| || ||||||||| | |||||||| | Sbjct 18708 GGAAAATAAACTAAACAGGATTCCCTTAGTAAAGGGGAGTGAACA---AGGAGCCCAGTG 18652 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||| | ||| |||| || || ||| ||| || ||| Sbjct 18651 CCAAATCCCTGTCCCTTGGTGCGGTGCAGGAAATGAGGTGTA 18610 >seq12367 Length=565369 Score = 77.0 bits (84), Expect = 1e-12 Identities = 76/98 (78%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | |||||||||||| ||| ||||| || |||||||||| | ||||| ||| Sbjct 153714 AAATGGAACTAACCAGGAAGACCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 153770 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 |||||| ||||| ||||||| | |||| |||||||| Sbjct 153771 AAATCCCTGCCCCTTGGTGGGGTGAGGGAAATGTGGCG 153808 Score = 77.0 bits (84), Expect = 1e-12 Identities = 76/98 (78%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | |||||||||||| ||| ||||| || |||||||||| | ||||| ||| Sbjct 161648 AAATGGAACTAACCAGGAAGACCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 161704 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 |||||| ||||| ||||||| | |||| |||||||| Sbjct 161705 AAATCCCTGCCCCTTGGTGGGGTGAGGGAAATGTGGCG 161742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230372306640