Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4347 235 9e-60 seq2836 235 9e-60 seq9045 150 3e-34 seq5847 141 1e-31 seq3314 134 2e-29 >seq4347 Length=1756179 Score = 235 bits (260), Expect = 9e-60 Identities = 206/251 (82%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | Sbjct 616137 GTCAGTGTAGCGCGCGTGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTGC-T 616195 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 616196 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 616254 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||| ||||||||||||||||||| Sbjct 616255 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCATTATCGGAATTAACCAGAC 616314 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 616315 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 616374 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 616375 ATCAATCTGTC 616385 >seq2836 Length=447263 Score = 235 bits (260), Expect = 9e-60 Identities = 206/251 (82%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| |||||||| |||| | ||||||||||||||||||||||| ||||||| | Sbjct 188417 GTCAGTGTAGTGCGCGTGCAGCCCGGGACATCTAAGGGCATCACAGACCTCTTATTGC-T 188359 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCAT- 130 ||| || ||| |||||| | |||| | |||||||||||||| | | || ||| Sbjct 188358 CAATCT-CCAGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 188300 Query 131 -AGTCG--ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || | | | ||| |||||| | | ||||||||||||||| ||||||||||||| Sbjct 188299 CAGGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCAGAATTAACCAGAC 188240 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct 188239 AAATCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCACGGAATCAAGAAAGAGCT 188180 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 188179 ATCAATCTGTC 188169 >seq9045 Length=6017620 Score = 150 bits (166), Expect = 3e-34 Identities = 101/113 (89%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | || |||||||| |||||| ||||||||||||||||| |||||||| Sbjct 3808189 CTAGTTAGCATTTCAAAGTCTCGTTTGTTATCAAAATTAACCAGACAAATCGCTCCACCA 3808248 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 3808249 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 3808301 >seq5847 Length=2521317 Score = 141 bits (156), Expect = 1e-31 Identities = 105/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 |||| ||| | |||| | | |||||| ||| ||||| ||||| |||||||||||| || Sbjct 1109200 ATGGAACTAGTCAGCATGCCAGGGTCTCATTCCTTATCAGAATTTACCAGACAAATCGCT 1109141 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||| |||||||||||||||| || |||||| |||||||||| ||||||| Sbjct 1109140 CCACCAACTAAGAATGGCCATGCACCACCACGCACAGAATCGAGAAAGAGCTGTCAATCT 1109081 Query 256 GTC 258 ||| Sbjct 1109080 GTC 1109078 >seq3314 Length=5236811 Score = 134 bits (148), Expect = 2e-29 Identities = 160/212 (75%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| | |||| |||| | |||||||||||||||||||||||||||||| || Sbjct 4524401 GTCAGTGTAGCACACGTGTAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 4524459 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAAC--CA 129 || | || |||||| | |||| | ||||||||||||| | | || | Sbjct 4524460 GAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGATGTTGACTGCT 4524518 Query 130 TAGTCG--ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | ||| ||| |||||| | | ||||| ||| ||||| ||||||| ||||| Sbjct 4524519 TGGGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGAC 4524578 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||| |||||||||||||||||| |||||||| Sbjct 4524579 AAATTACTCCACCAACTAAGAACTGCCATGCA 4524610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796701034701