Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3305 244 2e-62
seq1869 205 2e-50
seq12367 188 1e-45
seq10823 89.7 9e-16
seq10490 84.2 4e-14
seq6736 82.4 1e-13
seq4181 80.6 5e-13
seq7602 75.2 2e-11
>seq3305
Length=366547
Score = 244 bits (270), Expect = 2e-62
Identities = 233/295 (79%), Gaps = 6/295 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 24546 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 24487
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| | |||||||| ||||||||| |||||||| |||| |||||||||||| | ||| |
Sbjct 24486 ACCATGGTCTAAAGCCAGCTCACATTCCCTATCAGTGCGTGAACAATCCATCTCTTGTTG 24427
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||| ||||| ||| |||||||||||| || || || |||
Sbjct 24426 AATTCTGCTTCACAATGATAGGTAGAGC---CATGGAAGGATCAAAACGCCACATCTCTA 24370
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
||| ||||||| ||| |||||||||||||||||||||||||||||| |||||| ||
Sbjct 24369 GGAAGGCTTGGCCACCAGAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 24310
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT--CATGGTTTGTATT 292
| ||| | || | |||||||| | ||| |||||| || ||| ||||||
Sbjct 24309 TAAAACCCAAAAGGTCAGAAGGATCGTGAAGCCCCACTTTCACAGGGTCTGTATT 24255
>seq1869
Length=319635
Score = 205 bits (226), Expect = 2e-50
Identities = 159/189 (84%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||| |||||||||||| | ||||||||||||||| ||||||||||| ||| |||
Sbjct 209759 GTAAAACTATCCTGTCTCATGATGTTCTAAACCCAGCTCAGGTTCCCTATTATTGGATGA 209818
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| |||||| |||| ||||||| |||| | |||||||||||| |||| || ||||
Sbjct 209819 ACCATCCAATGCTTGGTGAATTCTTCTTC---ACAATAGGAAGAGCCAACATTGAGGGAT 209875
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
||||||| |||||||||||||| |||||| || |||| |||||||||||||||| ||
Sbjct 209876 CAAAAAGGGACGTCGCTATGAACTCTTGGCCGCTACAAAGTAGTTATCCCTGTGGTATCT 209935
Query 222 TTTCTGGCA 230
|||||| ||
Sbjct 209936 TTTCTGACA 209944
>seq12367
Length=565369
Score = 188 bits (208), Expect = 1e-45
Identities = 158/193 (82%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||||||||||||| || | ||||||| |||||| ||||| | ||| |||||||
Sbjct 165289 GTAAAACTAACCTGTCTCACGATGTTCTAAACTAAGCTCAGGTTCCTTGTTACTGGGTGA 165230
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| |||||| |||| |||||||||||| | ||||||||| || ||| | ||||||
Sbjct 165229 ACCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGATCCAACACCAAAGGAT 165173
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
|||||||||| || ||||||||| |||||| | ||||| |||||||||||||||| ||
Sbjct 165172 CAAAAAGCAATGTTGCTATGAACTCTTGGCCACTACAAGGCAGTTATCCCTGTGGTGTCT 165113
Query 222 TTTCTGGCACCTC 234
| |||| ||| ||
Sbjct 165112 TCTCTGACACGTC 165100
>seq10823
Length=5441719
Score = 89.7 bits (98), Expect = 9e-16
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
||||||||||| ||| |||| |||||||||||| || |||||||||||||||| |||||
Sbjct 2810259 TAGGAAGAGCCACCATTGAAGCATCAAAAAGCAAGGTTGCTATGAACGCTTGGCCGCCAC 2810318
Query 198 AAGCCAG 204
|||||||
Sbjct 2810319 AAGCCAG 2810325
>seq10490
Length=1115594
Score = 84.2 bits (92), Expect = 4e-14
Identities = 155/228 (68%), Gaps = 21/228 (9%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||| ||||| | | | | |||| | ||||||||||| | ||
Sbjct 1088089 TCATCAGTAGGACAAAACTGTCCTGTATTACCATTGCCTAATCACAGCTCACGTT-CTTA 1088147
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137
||| |||| ||||||||| || |||| ||| ||||||| ||||
Sbjct 1088148 TTAATGGGCGAACAATCCCACCCTTAGTGAAGGCTGCTTCATAATGAAGAACCAATATTT 1088207
Query 138 ---TAGGAAGAGCCGACATCGAAGGATCAAA-AAGCAACG---TCGCTATGAACGCTTGG 190
| |||| || | ||| ||||| |||| || || | | || ||||| |||||
Sbjct 1088208 TACAACGAAGTGCTAATATCTAAGGACCAAACAAACAGTGGAATTGCCATGAATACTTGG 1088267
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
| ||||| |||| ||| ||||| ||| |||||| ||||||| ||
Sbjct 1088268 CCACCACATTGCAGTGATCTCTGTGATAAACTTTCTGACACCTCTTGC 1088315
>seq6736
Length=2047568
Score = 82.4 bits (90), Expect = 1e-13
Identities = 68/82 (83%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 1091889 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 1091830
Query 60 ATGACGGTCTAAACCCAGCTCA 81
| || ||||||||||||| |||
Sbjct 1091829 AGGATGGTCTAAACCCAGATCA 1091808
>seq4181
Length=4455746
Score = 80.6 bits (88), Expect = 5e-13
Identities = 98/134 (73%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220
||| |||| | || |||||||| ||||| | ||||||||||||||| ||||| || ||
Sbjct 3528916 TCACAAAGTGATGTTGCTATGAATGCTTGACCACCACAAGCCAGTTATTCCTGTAGTCAC 3528857
Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
||||||| || ||| || | ||| | || | ||||||| || || |||||
Sbjct 3528856 TTTTCTGACATCTCCTGCTTGAAACCCAAAAGGTCAGAAGGATCATGAGTCCCTGCTTTC 3528797
Query 281 ATGGTTTGTATTCA 294
| ||| ||||||||
Sbjct 3528796 AAGGTCTGTATTCA 3528783
>seq7602
Length=1547892
Score = 75.2 bits (82), Expect = 2e-11
Identities = 50/56 (89%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||| || ||||| || ||||||||||||||| |||||||| ||||||||
Sbjct 404989 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAAGTCAGTTATCTCTGTGGTA 404934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854290457376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |