Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3305 244 2e-62 seq1869 205 2e-50 seq12367 188 1e-45 seq10823 89.7 9e-16 seq10490 84.2 4e-14 seq6736 82.4 1e-13 seq4181 80.6 5e-13 seq7602 75.2 2e-11 >seq3305 Length=366547 Score = 244 bits (270), Expect = 2e-62 Identities = 233/295 (79%), Gaps = 6/295 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 24546 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 24487 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | | |||||||| ||||||||| |||||||| |||| |||||||||||| | ||| | Sbjct 24486 ACCATGGTCTAAAGCCAGCTCACATTCCCTATCAGTGCGTGAACAATCCATCTCTTGTTG 24427 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||| ||||| ||| |||||||||||| || || || ||| Sbjct 24426 AATTCTGCTTCACAATGATAGGTAGAGC---CATGGAAGGATCAAAACGCCACATCTCTA 24370 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||| || Sbjct 24369 GGAAGGCTTGGCCACCAGAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 24310 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT--CATGGTTTGTATT 292 | ||| | || | |||||||| | ||| |||||| || ||| |||||| Sbjct 24309 TAAAACCCAAAAGGTCAGAAGGATCGTGAAGCCCCACTTTCACAGGGTCTGTATT 24255 >seq1869 Length=319635 Score = 205 bits (226), Expect = 2e-50 Identities = 159/189 (84%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101 ||||||||| |||||||||||| | ||||||||||||||| ||||||||||| ||| ||| Sbjct 209759 GTAAAACTATCCTGTCTCATGATGTTCTAAACCCAGCTCAGGTTCCCTATTATTGGATGA 209818 Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 || |||||| |||| ||||||| |||| | |||||||||||| |||| || |||| Sbjct 209819 ACCATCCAATGCTTGGTGAATTCTTCTTC---ACAATAGGAAGAGCCAACATTGAGGGAT 209875 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 ||||||| |||||||||||||| |||||| || |||| |||||||||||||||| || Sbjct 209876 CAAAAAGGGACGTCGCTATGAACTCTTGGCCGCTACAAAGTAGTTATCCCTGTGGTATCT 209935 Query 222 TTTCTGGCA 230 |||||| || Sbjct 209936 TTTCTGACA 209944 >seq12367 Length=565369 Score = 188 bits (208), Expect = 1e-45 Identities = 158/193 (82%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101 ||||||||||||||||||| || | ||||||| |||||| ||||| | ||| ||||||| Sbjct 165289 GTAAAACTAACCTGTCTCACGATGTTCTAAACTAAGCTCAGGTTCCTTGTTACTGGGTGA 165230 Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 || |||||| |||| |||||||||||| | ||||||||| || ||| | |||||| Sbjct 165229 ACCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGATCCAACACCAAAGGAT 165173 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||||||| || ||||||||| |||||| | ||||| |||||||||||||||| || Sbjct 165172 CAAAAAGCAATGTTGCTATGAACTCTTGGCCACTACAAGGCAGTTATCCCTGTGGTGTCT 165113 Query 222 TTTCTGGCACCTC 234 | |||| ||| || Sbjct 165112 TCTCTGACACGTC 165100 >seq10823 Length=5441719 Score = 89.7 bits (98), Expect = 9e-16 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||||| ||| |||| |||||||||||| || |||||||||||||||| ||||| Sbjct 2810259 TAGGAAGAGCCACCATTGAAGCATCAAAAAGCAAGGTTGCTATGAACGCTTGGCCGCCAC 2810318 Query 198 AAGCCAG 204 ||||||| Sbjct 2810319 AAGCCAG 2810325 >seq10490 Length=1115594 Score = 84.2 bits (92), Expect = 4e-14 Identities = 155/228 (68%), Gaps = 21/228 (9%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||| ||||| | | | | |||| | ||||||||||| | || Sbjct 1088089 TCATCAGTAGGACAAAACTGTCCTGTATTACCATTGCCTAATCACAGCTCACGTT-CTTA 1088147 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137 ||| |||| ||||||||| || |||| ||| ||||||| |||| Sbjct 1088148 TTAATGGGCGAACAATCCCACCCTTAGTGAAGGCTGCTTCATAATGAAGAACCAATATTT 1088207 Query 138 ---TAGGAAGAGCCGACATCGAAGGATCAAA-AAGCAACG---TCGCTATGAACGCTTGG 190 | |||| || | ||| ||||| |||| || || | | || ||||| ||||| Sbjct 1088208 TACAACGAAGTGCTAATATCTAAGGACCAAACAAACAGTGGAATTGCCATGAATACTTGG 1088267 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 | ||||| |||| ||| ||||| ||| |||||| ||||||| || Sbjct 1088268 CCACCACATTGCAGTGATCTCTGTGATAAACTTTCTGACACCTCTTGC 1088315 >seq6736 Length=2047568 Score = 82.4 bits (90), Expect = 1e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 1091889 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 1091830 Query 60 ATGACGGTCTAAACCCAGCTCA 81 | || ||||||||||||| ||| Sbjct 1091829 AGGATGGTCTAAACCCAGATCA 1091808 >seq4181 Length=4455746 Score = 80.6 bits (88), Expect = 5e-13 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 ||| |||| | || |||||||| ||||| | ||||||||||||||| ||||| || || Sbjct 3528916 TCACAAAGTGATGTTGCTATGAATGCTTGACCACCACAAGCCAGTTATTCCTGTAGTCAC 3528857 Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||||||| || ||| || | ||| | || | ||||||| || || ||||| Sbjct 3528856 TTTTCTGACATCTCCTGCTTGAAACCCAAAAGGTCAGAAGGATCATGAGTCCCTGCTTTC 3528797 Query 281 ATGGTTTGTATTCA 294 | ||| |||||||| Sbjct 3528796 AAGGTCTGTATTCA 3528783 >seq7602 Length=1547892 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||| || ||||| || ||||||||||||||| |||||||| |||||||| Sbjct 404989 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAAGTCAGTTATCTCTGTGGTA 404934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854290457376