Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6736 86.0 1e-14 seq3303 77.0 5e-12 seq8679 73.4 6e-11 seq1114 73.4 6e-11 >seq6736 Length=2047568 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| || | ||||||| | ||||| | || | || |||| || || | Sbjct 1091887 GTAGGAGAGGAACGGCAGG-TTCAGAA-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 1091944 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | || |||||||| |||| |||||||| ||||||||||||| |||||||||| Sbjct 1091945 GGGGCAAAGCTACCGTCTGTGGGATTATGACTGAACGCCTCTACGTCAGAATCC 1091998 >seq3303 Length=5861414 Score = 77.0 bits (84), Expect = 5e-12 Identities = 84/109 (77%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 6 AGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGC 65 ||||||||| | | |||||| | ||| | | || | || |||| || || || | Sbjct 3918711 AGAGGAACCACAGG-TTCAGAC-ATTTGTTGTATGTGCTTGGCTGAGGAGCCAATGGGGT 3918768 Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 3918769 GAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 3918817 >seq8679 Length=1166048 Score = 73.4 bits (80), Expect = 6e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90 ||||| | || | || |||| || || || |||||||||||||||| ||| |||| Sbjct 700691 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGACTATGA 700632 Query 91 CTGAACGCCTCTAAGTCAGAATC 113 ||||| ||||||||||||||||| Sbjct 700631 CTGAAGGCCTCTAAGTCAGAATC 700609 >seq1114 Length=7334827 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121 || ||||||||||||| |||||||| |||||| ||||||||||||||||| | |||| Sbjct 3016445 GCAAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAAGTCAGAATCCCTCCCAG 3016502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819098252544