Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4781 150 3e-34 seq702 132 9e-29 seq947 102 2e-19 >seq4781 Length=103474 Score = 150 bits (166), Expect = 3e-34 Identities = 195/262 (74%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 100065 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 100122 Query 131 ATGCCCTT--AGATGTTCTGGGCCGCACGCGC--GCTACACTGACAGAGCCAACGAGTTC 186 |||||| | |||||| | |||| | || | ||| ||||||| | || || || | Sbjct 100123 ATGCCCCTTAAGATGTCCGGGGCTACCTGCACCGGCT-CACTGACTGGCTCAGCGTGTGC 100181 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | Sbjct 100182 CTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGG 100241 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||| Sbjct 100242 ATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTT 100301 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 100302 GATTAAGTCCCTGCCCTTTGTA 100323 >seq702 Length=116768492 Score = 132 bits (146), Expect = 9e-29 Identities = 189/260 (73%), Gaps = 11/260 (4%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 || ||||||||||| | ||| ||| || | || ||||| ||||||||||||||| Sbjct 59525946 CTGCTTAGAGGGACAAGTGGCATTCA--CCCACCCGAGATTGAG-CAATAACAGGTCTGT 59526002 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| | |||| ||||||||||||||||||| | || || || | | Sbjct 59526003 GATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTA 59526062 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCAT 248 ||| ||||| ||| |||||| | | || || || | | ||||| | | || Sbjct 59526063 CCCTACGCCGGCAGGCGCGGGTAACCGATTGAACCTGATTCACTAATAGGGATTGGGGAT 59526122 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| ||| | ||| ||||| |||||||| || ||||| ||| ||| | Sbjct 59526123 TGCAATTATT-CTCATGAACAAGGAACTCCTAGTAAATGCAGGTCATAAGCTCGC----A 59526177 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| |||||| | |||||| Sbjct 59526178 TTAAGTCCCTACGTTTTGTA 59526197 >seq947 Length=108171978 Score = 102 bits (112), Expect = 2e-19 Identities = 86/102 (84%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 102456645 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 102456702 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 |||||||||||||| | |||| |||||||||||||||||||| Sbjct 102456703 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACA 102456744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947127273984