Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4781 390 3e-106 seq1 75.2 3e-11 >seq4781 Length=103474 Score = 390 bits (432), Expect = 3e-106 Identities = 421/555 (76%), Gaps = 57/555 (10%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 99186 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 99127 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 99126 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 99067 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 99066 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 99007 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 99006 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 98947 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCC------ 285 || | |||||| | | ||||| || ||||||| || ||| Sbjct 98946 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 98887 Query 286 ----------CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACAC----C 321 ||| ||| | ||||| |||| |||| |||||| ||| | Sbjct 98886 CCGGCCGGGGCCGGAGGGGAGCTCACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 98828 Query 322 CCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || ||||| ||||| | |||||||||||||||||||||||||| |||| Sbjct 98827 CCCCGCGAAG--GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTA 98770 Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| |||| | || | | | |||| ||| ||||||||||||||||||||||||| Sbjct 98769 TCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGC 98710 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 98709 AGTTTCACTGTACCAGCCGTGTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 98650 Query 490 TATGACTACTGGCAG 504 |||| |||||||||| Sbjct 98649 TATG-CTACTGGCAG 98636 >seq1 Length=114275543 Score = 75.2 bits (82), Expect = 3e-11 Identities = 109/149 (73%), Gaps = 10/149 (7%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT----AGTAAGGTACTATCAAA 398 |||||||||||| || |||| ||||| |||| ||| | || ||| | | ||| Sbjct 7172022 AGCATGTATTAGTTCCAGAAGCACCACAGTTACCCAAGAGAGGAGCAAGTGGCCA--AAA 7171965 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT-ATAG-ATTGCTTATACT 456 ||| | |||||||||||||||||||| |||| || |||| || ||| | ||| Sbjct 7171964 GGAACCACAACTGATTTAATGAGCCATTTACAGTCTCCCTGTGCCAGCCATGC--ACACT 7171907 Query 457 TAGACATGCATGGCTTAATCTTTGAGACA 485 |||||||||| ||||| ||||| ||||| Sbjct 7171906 TAGACATGCACAGCTTAGTCTTTCAGACA 7171878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510284031488