Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq54 244 2e-62 seq17 147 3e-33 seq6 141 1e-31 seq18 131 3e-28 >seq54 Length=4681 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 4262 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 4320 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 4321 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 4379 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 4380 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 4439 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 4440 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 4499 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 4500 ATCAATCTGTC 4510 >seq17 Length=170588018 Score = 147 bits (162), Expect = 3e-33 Identities = 163/214 (76%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111 |||||||||| ||||||||| |||| || ||| ||| ||| | |||||||||| Sbjct 164836999 GCATCACAGATCTGTTATTGT-TCAATCTCGGGTTG-CTGAGCACCACTTGTCCCTCTAA 164836942 Query 112 GAAGCCAGCCA---CCAAC----CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCG 164 ||||| | || || || | ||| ||| | |||| | | |||||| Sbjct 164836941 GAAGCTGGGGGAGGCCGACTGCTCAGGGATCATGTAACTAGTCAGCATGCCATGGTCTCA 164836882 Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224 ||| ||||| ||||| |||||||||||| ||||||||| |||||| |||||||||||||| Sbjct 164836881 TTCCTTATCAGAATTTACCAGACAAATCGCTCCACCAATTAAGAATGGCCATGCACCACC 164836822 Query 225 ACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| |||||||||| |||||||||| Sbjct 164836821 ACCCATAGAATCGAGAAAGAGCTGTCAATCTGTC 164836788 >seq6 Length=126788305 Score = 141 bits (156), Expect = 1e-31 Identities = 102/117 (87%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | || |||||||| |||||| ||||||||||||||||| |||||||| Sbjct 24644906 CTAGTTAGCATTTCAAAGTCTCGTTTGTTATCAAAATTAACCAGACAAATCGCTCCACCA 24644847 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| ||||||||| ||||||||| ||||| |||||||||||||||||| || Sbjct 24644846 ACTAAGAANGGCCATGCA-CACCACCCACGGAATCGAGAAAGAGCTATCAATCTNTC 24644791 >seq18 Length=153844193 Score = 131 bits (144), Expect = 3e-28 Identities = 158/210 (75%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||| | ||||| |||| | | ||| |||||||||||||||||||||||| |||| Sbjct 139815810 CAGTGTAGCACACGTGCAGCCCTGGATATCCAAGGGCATCACAGACCTGTTATTG-CTCA 139815868 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAAC-CATAG 132 | | || |||||| | |||| | ||||||||||||| | | | || | | Sbjct 139815869 ATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGATGCTGACTGCTTG 139815927 Query 133 TCG---ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | ||| ||| |||||| | | ||||| ||| ||||| ||||||| ||||||| Sbjct 139815928 TGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGACAA 139815987 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCA 219 || |||||||||||||||||| || ||||| Sbjct 139815988 ATTACTCCACCAACTAAGAACTGCTATGCA 139816017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794333401269