Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq377 345 7e-93 seq11 185 1e-44 seq16 91.5 3e-16 seq8 78.8 2e-12 >seq377 Length=679 Score = 345 bits (382), Expect = 7e-93 Identities = 255/295 (86%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 4 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 63 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 64 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 123 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 124 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 183 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 184 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 243 Query 240 TCAAATTTC-GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 244 TAAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 298 >seq11 Length=58747148 Score = 185 bits (204), Expect = 1e-44 Identities = 157/193 (81%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101 ||||||||||||||||||| || | ||||||| |||||| ||||| | ||| || |||| Sbjct 20240522 GTAAAACTAACCTGTCTCACGATGTTCTAAACTAAGCTCAGGTTCCTTGTTACTGAGTGA 20240581 Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 || |||||| |||| |||||||||||| | ||||||||| || ||| | |||||| Sbjct 20240582 ACCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGATCCAACACCAAAGGAT 20240638 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||||||| || |||||||| |||||| | ||||| ||||||||||||||||| || Sbjct 20240639 CAAAAAGCAATGTTGCTATGAATTCTTGGCCACTACAAGGCAGTTATCCCTGTGGTATCT 20240698 Query 222 TTTCTGGCACCTC 234 | |||| ||| || Sbjct 20240699 TCTCTGCCACATC 20240711 >seq16 Length=174288623 Score = 91.5 bits (100), Expect = 3e-16 Identities = 153/224 (68%), Gaps = 17/224 (8%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||| ||||| ||| | | |||| | ||||||||||| | || Sbjct 120865511 TCATCAGTAGGACAAAACTGTCCTGTATCACCATTGCCTAATCACAGCTCACGTT-CTTA 120865453 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137 ||| |||||||||||||| || |||| ||| ||||||| ||| Sbjct 120865452 TTAATGGGTGAACAATCCCACCCTTAGTGAAGGCTGCTTCACAGTGAAGAACCAATATTT 120865393 Query 138 ---TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 | |||| || | ||| ||||| |||| || | | || ||||| |||||| | Sbjct 120865392 TACAACGAAGTGCTAATATCTAAGGACCAAACAGTGGCATTGCCATGAATACTTGGCCAC 120865333 Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||| || | ||| ||||| ||| |||||| ||||||| || Sbjct 120865332 CACATTGCAATGATCTCTGTGATAAACTTTCTGACACCTCTTGC 120865289 >seq8 Length=70300957 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||| || ||||| || |||||||||||||||||||||||| |||||||| Sbjct 52756437 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAAGCCAGTTATCTCTGTGGTA 52756382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 851669773344