Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq406 165 1e-38
seq334 131 3e-28
seq91 102 1e-19
seq1919 100 4e-19
seq1931 91.5 2e-16
seq2654 87.8 3e-15
seq1553 78.8 1e-12
seq1918 75.2 2e-11
>seq406
Length=121039945
Score = 165 bits (182), Expect = 1e-38
Identities = 181/234 (77%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 26147285 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 26147228
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||| ||||| | ||||||||||||| ||||| | ||
Sbjct 26147227 CTCGTTCATGGGGAATAAT-GCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 26147169
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 26147168 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 26147109
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 26147108 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 26147056
Score = 87.8 bits (96), Expect = 3e-15
Identities = 163/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||| |||||| || |||| || | ||| || || | | |||||| |||||
Sbjct 25533646 GTAAAAAGGACAGGGATTTAATCAATGCAATCTT-ATAACCCACACTTACTGAGAATT-- 25533702
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
| || | | || ||||||||| | ||| |||||| || || || |||| ||
Sbjct 25533703 --CATTCATGGGGAAAAATTGCAATCCCCGATCACCATCATGAATGGGGTTCAAAAGGTT 25533760
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | ||| | | ||| | || | |||| | |||||||| || | |||||
Sbjct 25533761 ACCCACATCTGCCACATAGGGT-AGGCACAAGCTGAACAGATCAGTGTGGCACACGTGCA 25533819
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | | |||| |||||||||||||| |||||||| ||||| || | ||||
Sbjct 25533820 GCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTCAATCTCGCATGGC 25533872
>seq334
Length=143122389
Score = 131 bits (144), Expect = 3e-28
Identities = 179/241 (74%), Gaps = 23/241 (10%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| | || | ||||| ||||| ||| |||||| |||||| |
Sbjct 47665378 GTACAAAGGGCAGGGACTTC----ACTCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 47665431
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAA- 115
||| || | || || ||||||||| | ||||||||||| |||| |||||
Sbjct 47665432 CTCATTCATGAGAAATAATTGCAATCCCCGATCCCCATCAC----AAATGGGGTTCAACC 47665487
Query 116 GATTACCCGGACCTGTCGGCCAAGGTGA-TAG--ACTCGTTGAATACATCAGTGTAGCGC 172
| ||||||| |||| |||| | | ||| || || ||| ||||||||||||
Sbjct 47665488 GGTTACCCG----TGTCTGCCACGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGC 47665543
Query 173 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232
|| ||| |||| | |||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 47665544 GCATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGG 47665602
Query 233 C 233
|
Sbjct 47665603 C 47665603
>seq91
Length=163208435
Score = 102 bits (112), Expect = 1e-19
Identities = 151/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70
|||||| || |||| | ||||| ||||||| | ||||||||||||| ||||| | | |
Sbjct 5395459 CAGGGATTTAATCAATGTAAGCTT-ATGACTCACTCTTACTAGGAATT-CCTCGGTCATG 5395402
Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATTACCCGGACCT 129
|| ||||||||| | |||||||||| || ||||| || ||||| | |||
Sbjct 5395401 GGAAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAAGAGTTTACCAGCGCCT 5395342
Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189
| |||| ||| | || || ||| | | |||||| || |||| |||| | |
Sbjct 5395341 GCCGGCGTAGGGTAGGCACACGCTGAGTCAGTTGGTGTAGTGCATGTGCAGCCCCAGATA 5395282
Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCT 219
|||| | |||||||||||||||||||||||
Sbjct 5395281 TCTATGAGCATCACAGACCTGTTATTGCCT 5395252
>seq1919
Length=202788
Score = 100 bits (110), Expect = 4e-19
Identities = 169/237 (71%), Gaps = 11/237 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||| ||||||| || ||||||| | ||| || || | | |||||| ||||| |
Sbjct 174610 GTAAAAAGGACAGGGACTTAATCAACGCAATCTT-ATAACCCACACTTACTGAGAATT-C 174667
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
||| || | | || ||||| ||| | ||| |||||| || || || |||| ||
Sbjct 174668 CTCATTCATGGGGAAAAATTGAAATCCCCGATCACCATCATGAATGGGGTTCAAAAGGTT 174727
Query 120 ACCCGGACCTGTCGGCCA---AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
|||| || ||| |||| ||| | || | |||| | ||||||| || | |||
Sbjct 174728 ACCC--AC--GTCTGCCACATAGGGTAGGCACAAGCTGAACAGGTCAGTGTGGCACACGT 174783
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|| |||| | | |||| |||||||||||||| |||||||| ||||| || |||||
Sbjct 174784 GCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTCAATCTCGGGTGGC 174839
>seq1931
Length=242463
Score = 91.5 bits (100), Expect = 2e-16
Identities = 167/237 (70%), Gaps = 11/237 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||| ||||||| || ||||| | | ||| || || | | ||||| ||||| |
Sbjct 91697 GTAAAAAGGACAGGGACTTAATCAACACAATCTT-ATAACCCACATTTACTGAGAATT-C 91640
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
||| || | | || ||||| ||| | ||| |||||| || || || |||| ||
Sbjct 91639 CTCATTCATGGAGAAAAATTGAAATCCACAATCACCATCATGAATGGGGTTCAAAAGCTT 91580
Query 120 ACCCGGACCTGTCGGCCA---AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
|||| || ||| |||| ||| | || | |||| | ||||||| || | |||
Sbjct 91579 ACCC--AC--GTCTGCCACATAGGGTAGGCACAAGCTGAACAGGTCAGTGTGGCACACGT 91524
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|| |||| | | |||| |||||||||||||| |||||||| ||||| || |||||
Sbjct 91523 GCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTCAATCTCGGGTGGC 91468
>seq2654
Length=14085
Score = 87.8 bits (96), Expect = 3e-15
Identities = 163/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||| |||||| || |||| || | ||| || || | | |||||| |||||
Sbjct 12483 GTAAAAAGGACAGGGATTTAATCAATGCAATCTT-ATAACCCACACTTACTGAGAATT-- 12539
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
| || | | || ||||||||| | ||| |||||| || || || |||| ||
Sbjct 12540 --CATTCATGGGGAAAAATTGCAATCCCCGATCACCATCATGAATGGGGTTCAAAAGGTT 12597
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | ||| | | ||| | || | |||| | |||||||| || | |||||
Sbjct 12598 ACCCACATCTGCCACATAGGGT-AGGCACAAGCTGAACAGATCAGTGTGGCACACGTGCA 12656
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | | |||| |||||||||||||| |||||||| ||||| || | ||||
Sbjct 12657 GCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTCAATCTCGCATGGC 12709
>seq1553
Length=133034539
Score = 78.8 bits (86), Expect = 1e-12
Identities = 62/73 (85%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220
|||| ||||||| | ||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 16310218 TCAGCGTAGCGCACATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 16310160
Query 221 AAACTTCCGTGGC 233
|| || |||||
Sbjct 16310159 AATCTCAGGTGGC 16310147
>seq1918
Length=540987
Score = 75.2 bits (82), Expect = 2e-11
Identities = 163/237 (69%), Gaps = 14/237 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||| ||||||| || |||| || | || || || | | |||||| |||||
Sbjct 160442 GTAAAAAGGACAGGGACTTAATCAATGCAATTTT-ATAACCCACACTTACTGAGAATT-- 160498
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
| || | | || ||||||||| | ||| |||||| || || || |||| ||
Sbjct 160499 --CATTCATGGGGAAAAATTGCAATCCCCGATCACCATCATGAATGGGGTTCAAAAGGTT 160556
Query 120 ACCCGGACCTGTCGGCCA---AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
|| | || ||| |||| ||| | || | |||| | ||||||| || | |||
Sbjct 160557 ACTC--AC--GTCTGCCACATAGGGTAGGCACAAGCTGAACAAGTCAGTGTGGCACACGT 160612
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | | |||| |||||||||||||| |||||||| ||||| || | ||||
Sbjct 160613 TCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTCAATCTCGCATGGC 160668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751872629060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |