Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq406 145 1e-32
seq1724 143 5e-32
seq334 118 2e-24
seq493 104 4e-20
>seq406
Length=121039945
Score = 145 bits (160), Expect = 1e-32
Identities = 205/278 (74%), Gaps = 10/278 (4%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||| ||||||||||||||||
Sbjct 26146362 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTT-GAAAAAATTAGAGTGT 26146420
Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 26146421 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGAC-CGCGG 26146479
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||| ||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 26146480 TTCTA-TTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 26146538
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 26146539 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 26146598
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| ||| |||||||||||| ||||||||||
Sbjct 26146599 TT-GCCAAGAATG-TTTCATTAATCA-AGAACGAAAGT 26146633
>seq1724
Length=455154
Score = 143 bits (158), Expect = 5e-32
Identities = 202/279 (72%), Gaps = 6/279 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| || | ||| | | | |||| ||||||||||||||||| |
Sbjct 398359 ATGCTCTTAGCTGAGTGTCCCACTGGGCCCGAAGCATTTATTTTGAAAAAATTAGAGTAT 398300
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|| |||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 398299 TCTAAGCAGGCCTGAGCCACCTGGATACTGCAGCTAGGAATAATGGAATAGGACC-GCGG 398241
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||| ||||||||||||| || || | | |||||||| ||||| | || || ||
Sbjct 398240 TTCCATTTTGTTGGTTTTCAGAACTGAGGCCATGATTAAGAGGGACGGCCGAGGACGTTC 398181
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | | ||||||| |||||||||| | |||| || | ||||||||
Sbjct 398180 GTATTTCACAGCTAGAGGTGCAATTCTTGGACTGGCGCAAGATGGACCAGAGCGAAAGCA 398121
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|| ||||| |||||||||||||||| ||| |||| ||
Sbjct 398120 TTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAATTT 398083
>seq334
Length=143122389
Score = 118 bits (130), Expect = 2e-24
Identities = 170/235 (72%), Gaps = 11/235 (5%)
Strand=Plus/Minus
Query 82 GAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAAT 138
|||||||||||||| ||||||||||||| ||| | |||| ||| ||||||||
Sbjct 47666222 GAAAAAATTAGAGTATTCAAAGCAGGCCCGAGCTGCCTGGATACCGCAGCTAGGAATAAT 47666163
Query 139 AGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGG 198
||||||||| || |||||||||||||||||| | | | | | || ||||| ||||
Sbjct 47666162 GGAATAGGACC-GCAGTTCTATTTTGTTGGTTTTTGGAAATGAGGGCATAATTAAGAGGG 47666104
Query 199 ATAGTCGGGGGTGTCAGTATTCAATTGTCA---GAGGTGAAATTCTTGGATTTATTGAAG 255
|| | ||||| | ||||| || || ||||||||||||||||| | | |
Sbjct 47666103 ATGGCTGGGGGCATTTGTATTG---TGCCACTAGAGGTGAAATTCTTGGACTGGCACAGG 47666047
Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|| || | | |||||| || | ||| ||||||| |||||||| ||||||||
Sbjct 47666046 ACGGACCAGAGTGAAAGCATTTGCTAAGAATGTTTTTATTAATCA-AGAACGAAA 47665993
>seq493
Length=115148730
Score = 104 bits (114), Expect = 4e-20
Identities = 174/245 (71%), Gaps = 19/245 (8%)
Strand=Plus/Plus
Query 82 GAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG---CTCGAATACATTAGCATGGAATAAT 138
||||| |||||||||||| ||||||||| | | | |||| ||| ||||||||
Sbjct 114344895 GAAAATATTAGAGTGTTCCAAGCAGGCCCGAGCCACCTGGATACCACAGCTAGGAATAAT 114344954
Query 139 AGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC-CGTAATGATTAATAGG 197
|||||||| || |||||||||||||||||| | ||| | | |||||||| |||
Sbjct 114344955 GGAATAGGA-TCGCAGTTCTATTTTGTTGGTTT-TCGGAAATCAGGGCATGATTAAGAGG 114345012
Query 198 GATAGTCGGGGGTGTCAGTATTCA-ATTGT-----CAGAGGTGAAATTCTTGGATTTATT 251
||| | |||| | ||||| ||||| |||||||||||||||| | |
Sbjct 114345013 GATGGCTGGGG------GCATTCATATTGTGCCACTAGAGGTGAAATTCTTGTACTGGCG 114345066
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
| || || | | |||||| || | ||| |||||||||||||||| |||||||||
Sbjct 114345067 CAGGATGGACCAGAGTGAAAGCATTTGCTAAGAATGTTTTCATTAATCA-AGAACGAAAG 114345125
Query 312 TTAGG 316
|| ||
Sbjct 114345126 TTGGG 114345130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915039986432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |