Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq406 149 3e-33
seq1162 118 4e-24
seq893 111 7e-22
seq683 105 3e-20
seq91 80.6 1e-12
seq628 75.2 5e-11
>seq406
Length=121039945
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 26108639 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 26108698
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 26108699 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 26108758
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 26109744 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 26109803
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 26109804 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 26109863
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 26153233 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 26153292
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 26153293 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 26153352
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 26107429 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 26107488
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 26107489 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 26107548
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 26107549 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 26107588
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 26150895 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 26150954
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 26150955 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 26151014
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 26151015 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 26151054
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 26151885 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 26151944
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 26151945 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 26152004
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 26152005 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 26152044
>seq1162
Length=100215132
Score = 118 bits (130), Expect = 4e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| |||||||||||||| ||||||| |||| ||||||||||| ||||||
Sbjct 46773052 TGTTAGGACCCCAAAGATGGTGAACTGTGCCTGAGGAGGGCTAAGCCAGAGGACACTCTG 46772993
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | || || ||| |||||||||| |||||| | ||||| |||||||||
Sbjct 46772992 GTGGAGGTCCATTGCAGTGCTGTCGTGCAAATCCATCGTCCGACCTGGGTTTAGGGGCGA 46772933
>seq893
Length=109391073
Score = 111 bits (122), Expect = 7e-22
Identities = 100/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||| | |||| ||||| ||||| ||||||||| |||||| |||| ||||||||||
Sbjct 57605049 AGCACAAATGTTAGGACCTGAAAGGTGGTGAACTCTGCCTGGGCAGGGCAAAGCCAGAGG 57605108
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
||||||||||||||| | ||| || ||| |||||||||| || || || ||||| |
Sbjct 57605109 AAACTCTGGTGGAGGTCTGTAGCAGTCCTGATGTGCAAATCGGTCATCCAACCTGGGTGT 57605168
Query 676 AGGGGC 681
||||||
Sbjct 57605169 AGGGGC 57605174
>seq683
Length=106955855
Score = 105 bits (116), Expect = 3e-20
Identities = 94/118 (80%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| || || ||||||||| || |||||||| |||| ||||| |||||||||||||
Sbjct 50991646 TGTTAGGCACCAAAAGATGGTAAATTATGCCTGGGCAGGGCGAAGCGAGAGGAAACTCTG 50991705
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||| || | || ||| ||| ||||||||||| || || || |||||||||||||
Sbjct 50991706 GTGGGGGTCTGTAGTGGTCCTGACGTGCAAATCGGTCATCTGATCTGGGTATAGGGGC 50991763
Score = 105 bits (116), Expect = 3e-20
Identities = 94/118 (80%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| || || ||||||||| || |||||||| |||| ||||| |||||||||||||
Sbjct 51013276 TGTTAGGCACCAAAAGATGGTAAATTATGCCTGGGCAGGGCGAAGCGAGAGGAAACTCTG 51013335
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||| || | || ||| ||| ||||||||||| || || || |||||||||||||
Sbjct 51013336 GTGGGGGTCTGTAGTGGTCCTGACGTGCAAATCGGTCATCTGATCTGGGTATAGGGGC 51013393
>seq91
Length=163208435
Score = 80.6 bits (88), Expect = 1e-12
Identities = 94/124 (76%), Gaps = 6/124 (5%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||| ||||||||||||||| |||||| |||| ||||| ||||||| ||
Sbjct 76202567 TGTTAGGACTTGAAAGATGGTGAACTGTGCCTGGTCAGGGCAAAGCCGGAGGAAA--CTA 76202510
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC-GTCA---AATTTGGGTATAGGG 679
||||| | | ||| || ||| |||| ||||| ||| |||| || |||||||||||
Sbjct 76202509 GTGGAAGTCCCTAGCAGTCCTGACGTGTAAATCAATCAGTCATCCAACCTGGGTATAGGG 76202450
Query 680 GCGA 683
| ||
Sbjct 76202449 GTGA 76202446
>seq628
Length=118206036
Score = 75.2 bits (82), Expect = 5e-11
Identities = 70/88 (80%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635
|||||||||||| ||||||||| || | |||||| ||||||||| |||||||| | |
Sbjct 91814449 AAAGATGGTGAATTATGCCTGAGCAGAGGAAAGCCACAGGAAACTC-GGTGGAGGTTTGT 91814391
Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTC 663
|| ||| ||| ||||| |||| || ||
Sbjct 91814390 AGTGGTCCTGATGTGCAGATCGGTCATC 91814363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079624968200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |