Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq406 241 2e-61
seq334 178 2e-42
seq91 165 1e-38
seq1553 145 1e-32
seq1931 89.7 8e-16
seq1919 89.7 8e-16
seq2654 87.8 3e-15
seq1918 86.0 1e-14
seq1914 75.2 2e-11
>seq406
Length=121039945
Score = 241 bits (266), Expect = 2e-61
Identities = 208/251 (83%), Gaps = 10/251 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 26147128 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 26147070
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | |||| | |||||||||||||| | | || ||| |
Sbjct 26147069 CAATCT-CGGGTGGCTG-ACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 26147012
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | |||||||||||||||||||||||||||||
Sbjct 26147011 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 26146952
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 26146951 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 26146892
Query 248 ATCAATCTGTC 258
|||||||||||
Sbjct 26146891 ATCAATCTGTC 26146881
Score = 87.8 bits (96), Expect = 3e-15
Identities = 81/100 (81%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| || | ||||| |||| | | |||| |||||||||||||| |||||||| |||
Sbjct 25533801 TCAGTGTGGCACACGTGCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTC 25533859
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
|| || || |||||| | |||| | |||||||||||||
Sbjct 25533860 AATCTCGCA-TGGCTGAATGCCACTTTTCCCTCTAAGAAG 25533898
>seq334
Length=143122389
Score = 178 bits (196), Expect = 2e-42
Identities = 178/226 (79%), Gaps = 19/226 (8%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||| ||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 47665531 GTCAGTGTAGCGCGCATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 47665589
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC---CAGCCACCAACCATA 131
||| | || |||||| | |||| | ||||||||||||||| | || || |
Sbjct 47665590 CAATC-TCGGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGCTGGGGGATGCCGAC--TG 47665646
Query 132 GTCGATGGG-------GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184
|| | ||| ||| |||||| | | ||||||||||||||||||||||||||
Sbjct 47665647 CTC-AGGGGTCACATAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCA 47665705
Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAT 230
|||||||||||||||||||||| |||||||||||| |||||||
Sbjct 47665706 GACAAATCACTCCACCAACTAA----GGCCATGCACCATCACCCAT 47665747
>seq91
Length=163208435
Score = 165 bits (182), Expect = 1e-38
Identities = 188/248 (76%), Gaps = 11/248 (4%)
Strand=Plus/Minus
Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 78
|||||| || |||| |||| | ||||| | ||||||||||||||||||||||| ||
Sbjct 5395307 GTGTAGTGCATGTGCAGCCCCAGATATCTATGAGCATCACAGACCTGTTATTGCCT--AA 5395250
Query 79 CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC----CATA 131
|| | ||| | ||| | ||||||||||||||| | || || ||
Sbjct 5395249 TCTCAGGTCACTGAACACCACTTGTCCCTCTAAGAAGCTGGGGGATGCCGACTGCTCAGG 5395190
Query 132 G-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
| ||| || ||| | |||| | | |||||||||| |||| ||||||||||||||||
Sbjct 5395189 GATCG-TGTAACTAGTCAGCATGCCAGGGTCTCGTTCCTTATTAGAATTAACCAGACAAA 5395131
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
|| ||||| |||||||||| ||||||||||||||||| ||| |||| |||||||||| ||
Sbjct 5395130 TCGCTCCAGCAACTAAGAATGGCCATGCACCACCACCTATACAATCGAGAAAGAGCTGTC 5395071
Query 251 AATCTGTC 258
||||||||
Sbjct 5395070 AATCTGTC 5395063
>seq1553
Length=133034539
Score = 145 bits (160), Expect = 1e-32
Identities = 163/214 (76%), Gaps = 13/214 (6%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||| ||||||| | ||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 16310219 GTCAGCGTAGCGCACATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 16310161
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------CCAGCCACCA 125
||| | || |||||| | |||| |||||||||||||| | | | |
Sbjct 16310160 CAATC-TCAGGTGGCTGAATGCCACCTGTCCCTCTAAGAAGTTGGGGGATGCTGACTGC- 16310103
Query 126 ACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185
| |||| || ||| |||||| | | |||||||| |||||||||||||| |||
Sbjct 16310102 TCGGGGGTCG-TGTAACTAGTTAGCATGCCAGAGTCTCGTTTGTTATCGGAATTAAACAG 16310044
Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCA 219
|||||| ||||||||||||||||| |||||||||
Sbjct 16310043 ACAAATTACTCCACCAACTAAGAATGGCCATGCA 16310010
>seq1931
Length=242463
Score = 89.7 bits (98), Expect = 8e-16
Identities = 82/101 (81%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||| || | ||||| |||| | | |||| |||||||||||||| |||||||| ||
Sbjct 91540 GTCAGTGTGGCACACGTGCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CT 91482
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| | || |||||| | |||| | ||||||||||||||
Sbjct 91481 CAATC-TCGGGTGGCTGAATGCCACTTGTCCCTCTAAGAAG 91442
>seq1919
Length=202788
Score = 89.7 bits (98), Expect = 8e-16
Identities = 82/101 (81%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||| || | ||||| |||| | | |||| |||||||||||||| |||||||| ||
Sbjct 174767 GTCAGTGTGGCACACGTGCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CT 174825
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| | || |||||| | |||| | ||||||||||||||
Sbjct 174826 CAATC-TCGGGTGGCTGAATGCCACTTGTCCCTCTAAGAAG 174865
>seq2654
Length=14085
Score = 87.8 bits (96), Expect = 3e-15
Identities = 81/100 (81%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| || | ||||| |||| | | |||| |||||||||||||| |||||||| |||
Sbjct 12638 TCAGTGTGGCACACGTGCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CTC 12696
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
|| || || |||||| | |||| | |||||||||||||
Sbjct 12697 AATCTCGCA-TGGCTGAATGCCACTTTTCCCTCTAAGAAG 12735
>seq1918
Length=540987
Score = 86.0 bits (94), Expect = 1e-14
Identities = 81/101 (80%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||| || | ||| | |||| | | |||| |||||||||||||| |||||||| ||
Sbjct 160596 GTCAGTGTGGCACACGTTCAGCCCTGGATATCTGAGGGCATCACAGACTTGTTATTG-CT 160654
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| || || |||||| | |||| | |||||||||||||
Sbjct 160655 CAATCTCGCA-TGGCTGAATGCCACTTATCCCTCTAAGAAG 160694
>seq1914
Length=51576
Score = 75.2 bits (82), Expect = 2e-11
Identities = 78/100 (78%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||| || | ||||| || | | | |||| |||||||||||||| ||| |||| ||
Sbjct 17471 GTCAGTGTGGCACACGTGCAGCTCTGGATATCTGAGGGCATCACAGACTTGTGATTG-CT 17413
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114
||| | || |||||| | ||| | |||||||||||||
Sbjct 17412 CAATC-TCGGGTGGCTGAACACCACTTGTCCCTCTAAGAA 17374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796665041004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |