Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq406 347 2e-93
seq6377 322 8e-86
seq683 190 3e-46
seq1685 105 1e-20
seq565 87.8 3e-15
seq1399 75.2 2e-11
>seq406
Length=121039945
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 26158149 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 26158090
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 26158089 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 26158030
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 26158029 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 26157970
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 26157969 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 26157910
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 26157909 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 26157856
Score = 334 bits (370), Expect = 1e-89
Identities = 253/294 (86%), Gaps = 3/294 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 26111638 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 26111579
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 26111578 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 26111519
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 26111518 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 26111459
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| |||||||||||||||||||||||||||| |||||| |||||| | |
Sbjct 26111458 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAAC-TTTCTGACACCTCCTG-C 26111401
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 26111400 TTAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 26111347
>seq6377
Length=4670
Score = 322 bits (356), Expect = 8e-86
Identities = 249/295 (84%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 4230 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 4289
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4290 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 4349
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||
Sbjct 4350 AATTCTGCTTCACAATGATAGGAAGAGCTGACATCGAAGGATCAAAAAGCGATGTCGCTA 4409
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||| ||||| | |||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 4410 TGAATGCTTGACCACCACAAGCCAGTTATCCCTGTGTTAACTTTTCTGGCACCTCCTGCT 4469
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
| ||| | || | ||||||| ||||| | |||||| ||| ||||||||
Sbjct 4470 TAAAACCCAAAAGGTCAGCAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 4524
>seq683
Length=106955855
Score = 190 bits (210), Expect = 3e-46
Identities = 145/171 (85%), Gaps = 3/171 (2%)
Strand=Plus/Minus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||||||||||||| |||| |||||||| |||||| ||||||| ||| |||||||
Sbjct 50994556 GTAAAACTAACCTGTCTCACGACGTTCTAAACCAAGCTCAGGTTCCCTGTTATTGGGTGA 50994497
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| ||||||||||| |||||||| ||| | ||||||||| || ||| | ||||||
Sbjct 50994496 ACCATCCAACGCTTGGTGAATTCTGTTTC---ACAATAGGAAGATCCAACACCAAAGGAT 50994440
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
|||||||||| |||||||||||| |||||| | ||||| |||||||||||
Sbjct 50994439 CAAAAAGCAATGTCGCTATGAACTCTTGGCCACTACAAGGCAGTTATCCCT 50994389
Score = 190 bits (210), Expect = 3e-46
Identities = 145/171 (85%), Gaps = 3/171 (2%)
Strand=Plus/Minus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||||||||||||| |||| |||||||| |||||| ||||||| ||| |||||||
Sbjct 51020074 GTAAAACTAACCTGTCTCACGACGTTCTAAACCAAGCTCAGGTTCCCTGTTATTGGGTGA 51020015
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| ||||||||||| |||||||| ||| | ||||||||| || ||| | ||||||
Sbjct 51020014 ACCATCCAACGCTTGGTGAATTCTGTTTC---ACAATAGGAAGATCCAACACCAAAGGAT 51019958
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
|||||||||| |||||||||||| |||||| | ||||| |||||||||||
Sbjct 51019957 CAAAAAGCAATGTCGCTATGAACTCTTGGCCACTACAAGGCAGTTATCCCT 51019907
>seq1685
Length=141252148
Score = 105 bits (116), Expect = 1e-20
Identities = 73/83 (88%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| | ||||||||||||| ||| ||||||||||||||| |||| ||||
Sbjct 64622213 AATTCTGCTTCACAACGATAGGAAGAGCCAACAGTGAAGGATCAAAAAGCCACGTTGCTA 64622272
Query 180 TGAACGCTTGGCTGCCACAAGCC 202
||||| |||||||||||||||||
Sbjct 64622273 TGAACTCTTGGCTGCCACAAGCC 64622295
>seq565
Length=117381234
Score = 87.8 bits (96), Expect = 3e-15
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
||||||||||| |||| |||| |||||||||||| || |||||||| ||||||| ||||
Sbjct 65850576 TAGGAAGAGCCAACATTGAAGCATCAAAAAGCAAGGTTGCTATGAATGCTTGGCAGCCAT 65850635
Query 198 AAGCCAGT 205
||||||||
Sbjct 65850636 AAGCCAGT 65850643
>seq1399
Length=81552678
Score = 75.2 bits (82), Expect = 2e-11
Identities = 50/56 (89%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||| || ||||| || ||||||||||||| |||||||||| ||||||||
Sbjct 28053627 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAGGCCAGTTATCTCTGTGGTA 28053682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854250616704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |