Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq406 80.6 3e-13
seq1724 78.8 1e-12
>seq406
Length=121039945
Score = 80.6 bits (88), Expect = 3e-13
Identities = 127/176 (72%), Gaps = 7/176 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||| ||||||||||||| |||||||||||||| || | |||| | |
Sbjct 26146398 TTTACTT-GAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 26146456
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||| ||||| ||||| | ||| | | ||||
Sbjct 26146457 GGAATAATGGAATAGGAC-CGCGGTTCTA-TTTGTTGGTTT-TCGGAACTGAGGCCATGA 26146513
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 26146514 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 26146569
>seq1724
Length=455154
Score = 78.8 bits (86), Expect = 1e-12
Identities = 125/176 (71%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69
|||| |||||||||||||||| ||| |||||||||| | | | |||| | |
Sbjct 398323 TTTATTTTGAAAAAATTAGAGTATTCTAAGCAGGCCTGAGCCACCTGGATACTGCAGCTA 398264
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||| ||||||| ||||| || || | | ||||
Sbjct 398263 GGAATAATGGAATAGGAC-CGCGGTTCCATTTTGTTGGTTTTCAGAACTG-AGGCCATGA 398206
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | || || || ||||| | | | ||||| ||||||||||
Sbjct 398205 TTAAGAGGGACGGCCGAGGACGTTCGTATTTCACAGCTAGAGGTGCAATTCTTGGA 398150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511913279360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |