Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq406 80.6 3e-13 seq1724 78.8 1e-12 >seq406 Length=121039945 Score = 80.6 bits (88), Expect = 3e-13 Identities = 127/176 (72%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||| ||||||||||||| |||||||||||||| || | |||| | | Sbjct 26146398 TTTACTT-GAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 26146456 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||| ||||| ||||| | ||| | | |||| Sbjct 26146457 GGAATAATGGAATAGGAC-CGCGGTTCTA-TTTGTTGGTTT-TCGGAACTGAGGCCATGA 26146513 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 26146514 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 26146569 >seq1724 Length=455154 Score = 78.8 bits (86), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69 |||| |||||||||||||||| ||| |||||||||| | | | |||| | | Sbjct 398323 TTTATTTTGAAAAAATTAGAGTATTCTAAGCAGGCCTGAGCCACCTGGATACTGCAGCTA 398264 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||| ||||||| ||||| || || | | |||| Sbjct 398263 GGAATAATGGAATAGGAC-CGCGGTTCCATTTTGTTGGTTTTCAGAACTG-AGGCCATGA 398206 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | || || || ||||| | | | ||||| |||||||||| Sbjct 398205 TTAAGAGGGACGGCCGAGGACGTTCGTATTTCACAGCTAGAGGTGCAATTCTTGGA 398150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511913279360