Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08]
17,484 sequences; 2,962,060,179 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq406 192 1e-46
seq334 150 3e-34
seq91 118 2e-24
seq1919 109 1e-21
seq1931 95.1 2e-17
seq2654 93.3 8e-17
seq1918 84.2 4e-14
seq1553 82.4 1e-13
>seq406
Length=121039945
Score = 192 bits (212), Expect = 1e-46
Identities = 199/257 (77%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
|||||||||||||| | ||| |||| || | ||||| |||||||||||||||||
Sbjct 26147031 CTTCTTAGAGGGACAAGTGGCGTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTGA 26147088
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
||||||||||||| | |||| ||||||||||||||||||| | || || || | | |
Sbjct 26147089 TGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTACC 26147148
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||||
Sbjct 26147149 CTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGC 26147208
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||||
Sbjct 26147209 -ATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTA 26147267
Query 312 CGTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 26147268 AGTCCCTGCCCTTTGTA 26147284
Score = 93.3 bits (102), Expect = 8e-17
Identities = 179/258 (69%), Gaps = 7/258 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||| | ||| | |||| ||| || ||||| |||||||| |||||||
Sbjct 25533898 CTTCTTAGAGGGAAAAGTGGCATTCAGCC-ATGCGAGATTGAG-CAATAACAAGTCTGTG 25533841
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| |||| | | |||| ||||| | || ||||||| || | || | | |
Sbjct 25533840 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGATCTGTTCAGCTTGTGCCT-A 25533782
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || || | ||||||| ||| | || | | || || ||| ||| | | ||||
Sbjct 25533781 CCCTATGTGGCAGATGTGGGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTG 25533722
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | | | |||| | |||||| | | || || || || ||||||
Sbjct 25533721 CAATTTTTCCCCATGA---ATGAATTCTCAGTAAGTGTGGGTTATAAGATTGCATTGATT 25533665
Query 311 ACGTCCCTGCCCTTTGTA 328
| |||||| ||||| ||
Sbjct 25533664 AAATCCCTGTCCTTTTTA 25533647
>seq334
Length=143122389
Score = 150 bits (166), Expect = 3e-34
Identities = 195/263 (74%), Gaps = 10/263 (4%)
Strand=Plus/Minus
Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126
|| ||||||||||||||| | ||| | |||| || | ||||| ||||||||||||
Sbjct 47665633 CCAGCTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAGGTC 47665576
Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186
|||||||||||||||||| | |||| ||| ||||||||||||||| | || || || |
Sbjct 47665575 TGTGATGCCCTTAGATGTCCAGGGCTGCATGCGCGCTACACTGACTGGCTCAGCGTGTGC 47665516
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
| ||| | || || |||||| | | || | | | ||| ||||||| | |
Sbjct 47665515 CT-ACCCTACGTGGCAGACACGGGTAACCGGTTGAACCCCATTTGTGATGGGGATCGGGG 47665457
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
|||||||||||| ||| | || ||||||| || |||||| ||| ||||| ||| ||
Sbjct 47665456 ATTGCAATTATTTCTCATGAATGAGGAATTCCCAGTAAGTGCGGGTCATAAGC-----TT 47665402
Query 307 GA-TTACGTCCCTGCCCTTTGTA 328
|| | | ||||||||||||||||
Sbjct 47665401 GAGTGAAGTCCCTGCCCTTTGTA 47665379
>seq91
Length=163208435
Score = 118 bits (130), Expect = 2e-24
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 112 AGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
||||||||||||||||||||||| | ||||| | |||| |||| || |||||| ||
Sbjct 5395252 AGGCAATAACAGGTCTGTGATGCTCATAGATATCTGGGGCTGCACATGCACTACACCAAC 5395311
Query 172 AGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231
|| || || || | | ||| ||||| ||| ||||| || | || | | ||
Sbjct 5395312 TGACTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCTGGTAAACTCTTGAACCCCATTCA 5395371
Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291
|| ||||||| | | |||||||||||| | | | | |||||||| ||||||||| | | |
Sbjct 5395372 TGATGGGGATTGGGGATTGCAATTATTTCCCATGACCGAGGAATTCCTAGTAAGAGTGAG 5395431
Query 292 TCATCAGCACGCGTTGATTACGTCCCTG 319
|||| ||| | ||||||| ||||||
Sbjct 5395432 TCATAAGCTTACATTGATTAAATCCCTG 5395459
>seq1919
Length=202788
Score = 109 bits (120), Expect = 1e-21
Identities = 182/258 (71%), Gaps = 4/258 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| |||||||| |||||||
Sbjct 174865 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAAGTCTGTG 174808
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| |||| | | |||| ||||| | || |||||||| || | || | | |
Sbjct 174807 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGACCTGTTCAGCTTGTGCCT-A 174749
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || || ||||||| ||| | || | | || || ||| ||| | | |||
Sbjct 174748 CCCTATGTGGCAGACGTGGGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTT 174689
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | || ||||||| | |||||| | | || || || |||||||||
Sbjct 174688 CAATTTTTCCCCATGAATGAGGAATTCTCAGTAAGTGTGGGTTATAAGATTGCGTTGATT 174629
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||| ||||| ||
Sbjct 174628 AAGTCCCTGTCCTTTTTA 174611
>seq1931
Length=242463
Score = 95.1 bits (104), Expect = 2e-17
Identities = 179/258 (69%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| |||||||| |||||||
Sbjct 91442 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAAGTCTGTG 91499
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| |||| | | |||| ||||| | || |||||||| || | || | | |
Sbjct 91500 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGACCTGTTCAGCTTGTGCCT-A 91558
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || || ||||||| ||| | || | | || || ||| ||| | | |||
Sbjct 91559 CCCTATGTGGCAGACGTGGGTAAGCTTTTGAACCCCATTCATGATGGTGATTGTGGATTT 91618
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | || ||||||| | ||||| | | || || || | |||||||
Sbjct 91619 CAATTTTTCTCCATGAATGAGGAATTCTCAGTAAATGTGGGTTATAAGATTGTGTTGATT 91678
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||| ||||| ||
Sbjct 91679 AAGTCCCTGTCCTTTTTA 91696
>seq2654
Length=14085
Score = 93.3 bits (102), Expect = 8e-17
Identities = 179/258 (69%), Gaps = 7/258 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||| | ||| | |||| ||| || ||||| |||||||| |||||||
Sbjct 12735 CTTCTTAGAGGGAAAAGTGGCATTCAGCC-ATGCGAGATTGAG-CAATAACAAGTCTGTG 12678
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| |||| | | |||| ||||| | || ||||||| || | || | | |
Sbjct 12677 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGATCTGTTCAGCTTGTGCCT-A 12619
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || || | ||||||| ||| | || | | || || ||| ||| | | ||||
Sbjct 12618 CCCTATGTGGCAGATGTGGGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTG 12559
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | | | |||| | |||||| | | || || || || ||||||
Sbjct 12558 CAATTTTTCCCCATGA---ATGAATTCTCAGTAAGTGTGGGTTATAAGATTGCATTGATT 12502
Query 311 ACGTCCCTGCCCTTTGTA 328
| |||||| ||||| ||
Sbjct 12501 AAATCCCTGTCCTTTTTA 12484
>seq1918
Length=540987
Score = 84.2 bits (92), Expect = 4e-14
Identities = 177/258 (69%), Gaps = 7/258 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||| | ||| | |||| ||| || ||||| |||||||| |||||||
Sbjct 160694 CTTCTTAGAGGGATAAGTGGCATTCAGCC-ATGCGAGATTGAG-CAATAACAAGTCTGTG 160637
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| |||| | | |||| | ||| | || |||||||| || | || | | |
Sbjct 160636 ATGCCCTCAGATATCCAGGGCTGAACGTGTGCCACACTGACTTGTTCAGCTTGTGCCT-A 160578
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || || || |||| ||| | || | | || || ||| ||| | | ||||
Sbjct 160577 CCCTATGTGGCAGACGTGAGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTG 160518
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | | | |||| | |||||| | | || || | || ||||||
Sbjct 160517 CAATTTTTCCCCATGA---ATGAATTCTCAGTAAGTGTGGGTTATAAAATTGCATTGATT 160461
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||| ||||| ||
Sbjct 160460 AAGTCCCTGTCCTTTTTA 160443
>seq1553
Length=133034539
Score = 82.4 bits (90), Expect = 1e-13
Identities = 81/101 (80%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| ||| | |||| || | ||||| ||||||||||||||||
Sbjct 16310121 CTTCTTAGAGGGACAGGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 16310178
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||| | |||| ||| | ||||||| |||||
Sbjct 16310179 ATGCCCTTAGATGTCCAGGGCTGCATGTGCGCTACGCTGAC 16310219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947034391552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |