Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq406 192 1e-46 seq334 150 3e-34 seq91 118 2e-24 seq1919 109 1e-21 seq1931 95.1 2e-17 seq2654 93.3 8e-17 seq1918 84.2 4e-14 seq1553 82.4 1e-13 >seq406 Length=121039945 Score = 192 bits (212), Expect = 1e-46 Identities = 199/257 (77%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | ||| |||| || | ||||| ||||||||||||||||| Sbjct 26147031 CTTCTTAGAGGGACAAGTGGCGTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTGA 26147088 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||||||||||||||||||| | || || || | | | Sbjct 26147089 TGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTACC 26147148 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||| Sbjct 26147149 CTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGC 26147208 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 26147209 -ATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTA 26147267 Query 312 CGTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 26147268 AGTCCCTGCCCTTTGTA 26147284 Score = 93.3 bits (102), Expect = 8e-17 Identities = 179/258 (69%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | ||| | |||| ||| || ||||| |||||||| ||||||| Sbjct 25533898 CTTCTTAGAGGGAAAAGTGGCATTCAGCC-ATGCGAGATTGAG-CAATAACAAGTCTGTG 25533841 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| |||| | | |||| ||||| | || ||||||| || | || | | | Sbjct 25533840 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGATCTGTTCAGCTTGTGCCT-A 25533782 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || || | ||||||| ||| | || | | || || ||| ||| | | |||| Sbjct 25533781 CCCTATGTGGCAGATGTGGGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTG 25533722 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | | | |||| | |||||| | | || || || || |||||| Sbjct 25533721 CAATTTTTCCCCATGA---ATGAATTCTCAGTAAGTGTGGGTTATAAGATTGCATTGATT 25533665 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||| ||||| || Sbjct 25533664 AAATCCCTGTCCTTTTTA 25533647 >seq334 Length=143122389 Score = 150 bits (166), Expect = 3e-34 Identities = 195/263 (74%), Gaps = 10/263 (4%) Strand=Plus/Minus Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 || ||||||||||||||| | ||| | |||| || | ||||| |||||||||||| Sbjct 47665633 CCAGCTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAGGTC 47665576 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 |||||||||||||||||| | |||| ||| ||||||||||||||| | || || || | Sbjct 47665575 TGTGATGCCCTTAGATGTCCAGGGCTGCATGCGCGCTACACTGACTGGCTCAGCGTGTGC 47665516 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | ||| | || || |||||| | | || | | | ||| ||||||| | | Sbjct 47665515 CT-ACCCTACGTGGCAGACACGGGTAACCGGTTGAACCCCATTTGTGATGGGGATCGGGG 47665457 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| ||| | || ||||||| || |||||| ||| ||||| ||| || Sbjct 47665456 ATTGCAATTATTTCTCATGAATGAGGAATTCCCAGTAAGTGCGGGTCATAAGC-----TT 47665402 Query 307 GA-TTACGTCCCTGCCCTTTGTA 328 || | | |||||||||||||||| Sbjct 47665401 GAGTGAAGTCCCTGCCCTTTGTA 47665379 >seq91 Length=163208435 Score = 118 bits (130), Expect = 2e-24 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 112 AGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 ||||||||||||||||||||||| | ||||| | |||| |||| || |||||| || Sbjct 5395252 AGGCAATAACAGGTCTGTGATGCTCATAGATATCTGGGGCTGCACATGCACTACACCAAC 5395311 Query 172 AGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 || || || || | | ||| ||||| ||| ||||| || | || | | || Sbjct 5395312 TGACTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCTGGTAAACTCTTGAACCCCATTCA 5395371 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 || ||||||| | | |||||||||||| | | | | |||||||| ||||||||| | | | Sbjct 5395372 TGATGGGGATTGGGGATTGCAATTATTTCCCATGACCGAGGAATTCCTAGTAAGAGTGAG 5395431 Query 292 TCATCAGCACGCGTTGATTACGTCCCTG 319 |||| ||| | ||||||| |||||| Sbjct 5395432 TCATAAGCTTACATTGATTAAATCCCTG 5395459 >seq1919 Length=202788 Score = 109 bits (120), Expect = 1e-21 Identities = 182/258 (71%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||| ||||||| Sbjct 174865 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAAGTCTGTG 174808 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| |||| | | |||| ||||| | || |||||||| || | || | | | Sbjct 174807 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGACCTGTTCAGCTTGTGCCT-A 174749 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || || ||||||| ||| | || | | || || ||| ||| | | ||| Sbjct 174748 CCCTATGTGGCAGACGTGGGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTT 174689 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | || ||||||| | |||||| | | || || || ||||||||| Sbjct 174688 CAATTTTTCCCCATGAATGAGGAATTCTCAGTAAGTGTGGGTTATAAGATTGCGTTGATT 174629 Query 311 ACGTCCCTGCCCTTTGTA 328 | ||||||| ||||| || Sbjct 174628 AAGTCCCTGTCCTTTTTA 174611 >seq1931 Length=242463 Score = 95.1 bits (104), Expect = 2e-17 Identities = 179/258 (69%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||| ||||||| Sbjct 91442 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAAGTCTGTG 91499 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| |||| | | |||| ||||| | || |||||||| || | || | | | Sbjct 91500 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGACCTGTTCAGCTTGTGCCT-A 91558 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || || ||||||| ||| | || | | || || ||| ||| | | ||| Sbjct 91559 CCCTATGTGGCAGACGTGGGTAAGCTTTTGAACCCCATTCATGATGGTGATTGTGGATTT 91618 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | || ||||||| | ||||| | | || || || | ||||||| Sbjct 91619 CAATTTTTCTCCATGAATGAGGAATTCTCAGTAAATGTGGGTTATAAGATTGTGTTGATT 91678 Query 311 ACGTCCCTGCCCTTTGTA 328 | ||||||| ||||| || Sbjct 91679 AAGTCCCTGTCCTTTTTA 91696 >seq2654 Length=14085 Score = 93.3 bits (102), Expect = 8e-17 Identities = 179/258 (69%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | ||| | |||| ||| || ||||| |||||||| ||||||| Sbjct 12735 CTTCTTAGAGGGAAAAGTGGCATTCAGCC-ATGCGAGATTGAG-CAATAACAAGTCTGTG 12678 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| |||| | | |||| ||||| | || ||||||| || | || | | | Sbjct 12677 ATGCCCTCAGATATCCAGGGCTGCACGTGTGCCACACTGATCTGTTCAGCTTGTGCCT-A 12619 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || || | ||||||| ||| | || | | || || ||| ||| | | |||| Sbjct 12618 CCCTATGTGGCAGATGTGGGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTG 12559 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | | | |||| | |||||| | | || || || || |||||| Sbjct 12558 CAATTTTTCCCCATGA---ATGAATTCTCAGTAAGTGTGGGTTATAAGATTGCATTGATT 12502 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||| ||||| || Sbjct 12501 AAATCCCTGTCCTTTTTA 12484 >seq1918 Length=540987 Score = 84.2 bits (92), Expect = 4e-14 Identities = 177/258 (69%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | ||| | |||| ||| || ||||| |||||||| ||||||| Sbjct 160694 CTTCTTAGAGGGATAAGTGGCATTCAGCC-ATGCGAGATTGAG-CAATAACAAGTCTGTG 160637 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| |||| | | |||| | ||| | || |||||||| || | || | | | Sbjct 160636 ATGCCCTCAGATATCCAGGGCTGAACGTGTGCCACACTGACTTGTTCAGCTTGTGCCT-A 160578 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || || || |||| ||| | || | | || || ||| ||| | | |||| Sbjct 160577 CCCTATGTGGCAGACGTGAGTAACCTTTTGAACCCCATTCATGATGGTGATCGGGGATTG 160518 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | | | |||| | |||||| | | || || | || |||||| Sbjct 160517 CAATTTTTCCCCATGA---ATGAATTCTCAGTAAGTGTGGGTTATAAAATTGCATTGATT 160461 Query 311 ACGTCCCTGCCCTTTGTA 328 | ||||||| ||||| || Sbjct 160460 AAGTCCCTGTCCTTTTTA 160443 >seq1553 Length=133034539 Score = 82.4 bits (90), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||| | |||| || | ||||| |||||||||||||||| Sbjct 16310121 CTTCTTAGAGGGACAGGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 16310178 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| ||| | ||||||| ||||| Sbjct 16310179 ATGCCCTTAGATGTCCAGGGCTGCATGTGCGCTACGCTGAC 16310219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947034391552