Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq331 141 1e-31 seq18 87.8 3e-15 seq230 80.6 4e-13 >seq331 Length=417405 Score = 141 bits (156), Expect = 1e-31 Identities = 170/226 (75%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||| ||||| ||||| ||| |||||| |||||| | Sbjct 314876 GTACAAAGGGCAGGGACTTAATCAACGGAAGCTT-ATGACCCGCACTTACTGGGAATT-C 314819 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | || ||||||||| | |||||||||| || |||| || || Sbjct 314818 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGCTCAACAGGTT 314759 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| | | ||| | || | ||| ||||||||| || ||||| Sbjct 314758 ACCCGCGCCTGCCTGGGTAGGGTAGGCACACACTGAGCCAGTCAGTGTAGTGCCCGTGCA 314699 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 314698 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 314654 >seq18 Length=28711273 Score = 87.8 bits (96), Expect = 3e-15 Identities = 162/237 (68%), Gaps = 32/237 (14%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||||||||||||| || ||||||| ||||| ||||| || |||||| |||| |||| Sbjct 22952518 TACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCTGCACTTACTGGGAA-TTCC 22952461 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATTA 120 ||||| | | || ||||||||| |||||||||| | ||| || | | ||| Sbjct 22952460 TCGTTCATGGGGAATAATTGCAATCCCTGATCCCCATCATGAATGGGGTTCAACGGGTTA 22952401 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | |||| || | ||| | || ||||| | Sbjct 22952400 CCAGTGCCTG-----CATGCTGAGCCAGTCATTGAA----------------------GC 22952368 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 ||||| ||||||||||||||||||| |||||||||| ||||| ||| ||||| ||| Sbjct 22952367 CCCAG-ACATCTAAGGGCATCACAGGCCTGTTATTG-CTCAATCTTGGGTGGCTTAA 22952313 >seq230 Length=2054077 Score = 80.6 bits (88), Expect = 4e-13 Identities = 166/239 (69%), Gaps = 15/239 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| || | || || || | || | |||||| |||||| | Sbjct 2024133 GTACAAAGGGCAGGGAATTA----AGGCAAGATT----ATTC-CACTTACTGGGAATT-C 2024084 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 ||||| | | || ||||||||| || |||||||||| || ||| ||| | || || Sbjct 2024083 CTCGTGCATGGGGAATAATTGCAATC-TCCATCCCCATCATGAATGACATTCAACAGGTT 2024025 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| | || ||| | | | ||| |||| ||||| || ||| Sbjct 2024024 ACCCACACCTGCCAGCATAGGGTAGGCAAACACTGAGCCAGTCAGCGTAGCACGTATGCA 2023965 Query 180 GCCCAGAACATCTAAGGGCATCAC-AGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 |||| |||||||||||||||| || || |||| | ||||| |||| |||||| || Sbjct 2023964 GCCCCAGGCATCTAAGGGCATCACAAGGCCAGTTACT--CTCAATCTTCAGTGGCCCAA 2023908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751943227995