Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq331 138 2e-30 seq230 75.2 2e-11 >seq331 Length=417405 Score = 138 bits (152), Expect = 2e-30 Identities = 199/277 (72%), Gaps = 9/277 (3%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||| |||| ||| | |||| | | |||||||||||||||||||| || Sbjct 313960 ATGCTCTTAGCTGAGTGTCCCGCAGGGCCAAAGCGTGTACTTTGAAAAAATTAGAGTCTT 314019 Query 99 CAAAGCAGGCCTTTG---CTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | | | |||| ||| |||||||| ||||||||| | | || Sbjct 314020 CAAAGCAGGCCTGAGCCACCTGGATACCGCAGCTAGGAATAATGGAATAGGACCT-CAGT 314078 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| || || | | |||||||| || || | |||| | | Sbjct 314079 TCTATTTTGTTGGTTTTCAGAACTGTGGCCATGATTAAGAGTGA----CCGGGGCATTTG 314134 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| | |||||||||||||||| | ||||| || | || ||||| | Sbjct 314135 TATTGTGCCGCTAGAGGTGAAATTCTTGCACCGGCGCAAGACGGACCAGAGCTAAAGCAT 314194 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | ||||| |||||||||||||||| ||||||||| Sbjct 314195 TTGCCAAGAATGTTTTCATTAATCA-ACAACGAAAGT 314230 >seq230 Length=2054077 Score = 75.2 bits (82), Expect = 2e-11 Identities = 164/239 (69%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGG 132 || ||||||||||||| || ||||||| ||| | ||| | |||| |||| || Sbjct 2023282 TAATTTGAAAAAATTAC--TGCTCAAAGCTGGCATGAGCTGCCTGGATACCGTAGCTAGG 2023339 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||| | |||| | | || |||||| ||||||||||| | | || | | ||||| | Sbjct 2023340 AATAGTGCAATAAGGC-TGTGGTTCTGCTTTGTTGGTTTTTGGTACTGAGGCCATGATGA 2023398 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | | ||| | || ||||| |||| || |||||| |||||||| | | Sbjct 2023399 AGACGGAGGGCTGGAGGTGTTCCTATTACATGACTAGAGGTAAAATTCTTCAACCAGTGC 2023458 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| |||| || ||| | || ||||| |||||||| |||| ||| ||| ||||| Sbjct 2023459 AAGAC-GACTATAGC-AAACCATTTCCCAAGAATGTTTTCGTTAAACAG-GAATGAAAG 2023514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915128678464