Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16]
7,793 sequences; 2,519,724,550 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq331 138 2e-30
seq230 75.2 2e-11
>seq331
Length=417405
Score = 138 bits (152), Expect = 2e-30
Identities = 199/277 (72%), Gaps = 9/277 (3%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||| |||| ||| | |||| | | |||||||||||||||||||| ||
Sbjct 313960 ATGCTCTTAGCTGAGTGTCCCGCAGGGCCAAAGCGTGTACTTTGAAAAAATTAGAGTCTT 314019
Query 99 CAAAGCAGGCCTTTG---CTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155
|||||||||||| | | | |||| ||| |||||||| ||||||||| | | ||
Sbjct 314020 CAAAGCAGGCCTGAGCCACCTGGATACCGCAGCTAGGAATAATGGAATAGGACCT-CAGT 314078
Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215
|||||||||||||||| || || | | |||||||| || || | |||| | |
Sbjct 314079 TCTATTTTGTTGGTTTTCAGAACTGTGGCCATGATTAAGAGTGA----CCGGGGCATTTG 314134
Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275
|||| | |||||||||||||||| | ||||| || | || ||||| |
Sbjct 314135 TATTGTGCCGCTAGAGGTGAAATTCTTGCACCGGCGCAAGACGGACCAGAGCTAAAGCAT 314194
Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
| ||||| |||||||||||||||| |||||||||
Sbjct 314195 TTGCCAAGAATGTTTTCATTAATCA-ACAACGAAAGT 314230
>seq230
Length=2054077
Score = 75.2 bits (82), Expect = 2e-11
Identities = 164/239 (69%), Gaps = 9/239 (4%)
Strand=Plus/Plus
Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGG 132
|| ||||||||||||| || ||||||| ||| | ||| | |||| |||| ||
Sbjct 2023282 TAATTTGAAAAAATTAC--TGCTCAAAGCTGGCATGAGCTGCCTGGATACCGTAGCTAGG 2023339
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
|||| | |||| | | || |||||| ||||||||||| | | || | | ||||| |
Sbjct 2023340 AATAGTGCAATAAGGC-TGTGGTTCTGCTTTGTTGGTTTTTGGTACTGAGGCCATGATGA 2023398
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
| | ||| | || ||||| |||| || |||||| |||||||| | |
Sbjct 2023399 AGACGGAGGGCTGGAGGTGTTCCTATTACATGACTAGAGGTAAAATTCTTCAACCAGTGC 2023458
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
||||| |||| || ||| | || ||||| |||||||| |||| ||| ||| |||||
Sbjct 2023459 AAGAC-GACTATAGC-AAACCATTTCCCAAGAATGTTTTCGTTAAACAG-GAATGAAAG 2023514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915128678464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |