Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq26 86.0 3e-14 seq103 77.0 1e-11 >seq26 Length=21254048 Score = 86.0 bits (94), Expect = 3e-14 Identities = 95/126 (75%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| |||| ||||||||||||| | || ||| ||||| | | ||||| ||||||| Sbjct 4475549 GAGTCAGGTTGCTTGGGAATGCAGCCCAAAGCGGGTAGTAAACTCCATCTAAGGCTAAAT 4475490 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| ||||| |||| ||||||| | | ||||| ||||||| |||||| | Sbjct 4475489 ACTGGCACGAGACTGATAATCAACAAGTACCATAAGGGAAAGTTGAAAAGAACTTTG--A 4475432 Query 160 AGAGAG 165 |||||| Sbjct 4475431 AGAGAG 4475426 >seq103 Length=7691674 Score = 77.0 bits (84), Expect = 1e-11 Identities = 86/115 (75%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||| || ||| |||||| |||||||| | ||| || |||| ||| ||||||| ||||| Sbjct 5602938 GTTAGGTCCCAAAAGATAGTGAACTAGGTCTGGGCAGAGTGATGCCCGAGGAAAGTCTGG 5602879 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||| | || ||| | | | |||||| ||| || |||||| ||||||| Sbjct 5602878 TGGAGGTCTGTAGGGGTCCCAGTGAGCAAATTTATCATCTGATTTGGATATAGGG 5602824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079832840150